RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	SLC7A13	Q8TCU3	470 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	KLHL6	Q8WZ60	621 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	POLR2J2	Q9GZM3	115 aa	Known RBP	13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	C3orf14	Q9HBI5	128 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	TIGAR	Q9NQ88	270 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	ASAH2	Q9NR71	780 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	CRNN	Q9UBG3	495 aa	Predicted RBP	13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	DENND4C	Q5VZ89	1909 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	PRAMEF27	A3QJZ7	478 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021		A8MV72	311 aa	Predicted RBP	13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	C5orf58	C9J3I9	102 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	PLD2	O14939	933 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	SPINT1	O43278	529 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	TPST2	O60704	377 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	TNNI3	P19429	210 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	XK	P51811	444 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	GPR50	Q13585	617 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	TEAD2	Q15562	447 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	FLYWCH1	Q4VC44	716 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	SAXO2	Q658L1	398 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	PGBD2	Q6P3X8	592 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	HMGN2P46	Q86SG4	172 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	GATAD2A	Q86YP4	633 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	NEURL3	Q96EH8	262 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	F2RL3	Q96RI0	385 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	TSSK6	Q9BXA6	273 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	NDOR1	Q9UHB4	597 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	TMCC3	Q9ULS5	477 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	WBP11	Q9Y2W2	641 aa	Known RBP	13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	WNT6	Q9Y6F9	365 aa		13.13	□□□□□ -0.31
PHGDH-233	ENST00000642021	PSMA1	P25786	263 aa	Known RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	MANF	P55145	182 aa	Known RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	TLE2	Q04725	743 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	HSPB3	Q12988	150 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	NCF4	Q15080	339 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	ATAD3C	Q5T2N8	411 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	C12orf73	Q69YU5	71 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	C6orf120	Q7Z4R8	191 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	FAM129C	Q86XR2	697 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	NANOGP1	Q8N7R0	232 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	KREMEN2	Q8NCW0	462 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	FLCN	Q8NFG4	579 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	TM4SF18	Q96CE8	201 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZDHHC5	Q9C0B5	715 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	POLR2J3	Q9H1A7	115 aa	Known RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	RERGL	Q9H628	205 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	DYRK4	Q9NR20	520 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	TVP23B	Q9NYZ1	205 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	PLXND1	Q9Y4D7	1925 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	WASHC1	A8K0Z3	465 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	FAM47E-STBD1	D6RA91	191 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	HMGN4	O00479	90 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	KPNA3	O00505	521 aa	Predicted RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	CAPN5	O15484	640 aa	Predicted RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	MOSPD3	O75425	235 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	EIF2S1	P05198	315 aa	Known RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	CLEC2L	P0C7M8	214 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	TAB1	Q15750	504 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	TMEM201	Q5SNT2	666 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	WASH2P	Q6VEQ5	465 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	PHC2	Q8IXK0	858 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	ANKRD53	Q8N9V6	530 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	TMEM203	Q969S6	136 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	DTD2	Q96FN9	168 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	SERHL2	Q9H4I8	314 aa		13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	MOV10	Q9HCE1	1003 aa	Known RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.12	□□□□□ -0.31
PHGDH-233	ENST00000642021	ANHX	E9PGG2	379 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZNF670-ZNF695	F2Z2N8	137 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	RFXAP	O00287	272 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	TLX2	O43763	284 aa	Predicted RBP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	PRKY	O43930	277 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	POP7	O75817	140 aa	Known RBP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	H1F0	P07305	194 aa	Known RBP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	DDC	P20711	480 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	ACADL	P28330	430 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	MAPK9	P45984	424 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	RORC	P51449	518 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	MESP2	Q0VG99	397 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	MADCAM1	Q13477	382 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	SYPL1	Q16563	259 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	TMPRSS11A	Q6ZMR5	421 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	MMAA	Q8IVH4	418 aa	Known RBP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR5AR1	Q8NGP9	310 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	COQ10A	Q96MF6	247 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	GPA33	Q99795	319 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	A4GALT	Q9NPC4	353 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	TDP1	Q9NUW8	608 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	MGAT4B	Q9UQ53	548 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	KRT8	P05787	483 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	LAG3	P18627	525 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	KCNJ5	P48544	419 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	PSPH	P78330	225 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	PRAMEF14	Q5SWL7	426 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	PRAMEF13	Q5VWM6	474 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	CASP12	Q6UXS9	341 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms