RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ALDH6A1Q02252 535 aaKnown RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 UBE3AQ05086 875 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CRB2Q5IJ48 1285 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 ATCAYQ86WG3 371 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CAPNS2Q96L46 248 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 TTYH2Q9BSA4 534 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 FBXL12Q9NXK8 326 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 FTSJ1Q9UET6 329 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 SPIN1Q9Y657 262 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-221ENST00000640341 CEP290O15078 2479 aa13.87□□□□□ -0.19
SCARB2-221ENST00000640341 SERTM1A2A2V5 107 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 PDPK1O15530 556 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 OR1F1O43749 312 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 OPRD1P41143 372 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF91Q05481 1191 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TUBA3EQ6PEY2 450 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TRIM48Q8IWZ4 208 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 AMER3Q8N944 861 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.86□□□□□ -0.195e-8■■■■□ 23.5
SCARB2-221ENST00000640341 C19orf43Q9BQ61 176 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 RSPO3Q9BXY4 272 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TMEM38AQ9H6F2 299 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 RMI1Q9H9A7 625 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 FKBP14Q9NWM8 211 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 CCDC59Q9P031 241 aaKnown RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF221Q9UK13 617 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 SCN8AQ9UQD0 1980 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TMCC2O75069 709 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 KLHL18O94889 574 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 RECKO95980 971 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 UQCRC2P22695 453 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 PTX3P26022 381 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ELAVL4P26378 380 aaKnown RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 CDC20Q12834 499 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 MAP4K2Q12851 820 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 HNRNPA0Q13151 305 aaKnown RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 IRF3Q14653 427 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 FNDC3BQ53EP0 1204 aaKnown RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ATAT1Q5SQI0 421 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TMC5Q6UXY8 1006 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 IQCHQ86VS3 1027 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 C17orf64Q86WR6 236 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 SFTPA1Q8IWL2 248 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 SYT14Q8NB59 555 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF486Q96H40 463 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 LRR1Q96L50 414 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 XKR8Q9H6D3 395 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 MYNNQ9NPC7 610 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 CRNNQ9UBG3 495 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 MAPRE3Q9UPY8 281 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 KLK4Q9Y5K2 254 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ADH1AP07327 375 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 RHOP08100 348 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 HBQ1P09105 142 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 OSMP13725 252 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 EEF1A2Q05639 463 aaKnown RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 C1DQ13901 141 aaKnown RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 HEPACAMQ14CZ8 416 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 SNAPC1Q16533 368 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 FAM214AQ32MH5 1076 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF750Q32MQ0 723 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 CCDC149Q6ZUS6 474 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 SLC9B2Q86UD5 537 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF547Q8IVP9 402 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 ADGRF3Q8IZF5 1079 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TFGQ92734 400 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 NUS1Q96E22 293 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TMEM80Q96HE8 168 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 DIRAS2Q96HU8 199 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 SDHCQ99643 169 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-221ENST00000640341 TM9SF2Q99805 663 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 C17orf62Q9BQA9 187 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 FNDC11Q9BVV2 318 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 HOXD1Q9GZZ0 328 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 SSR3Q9UNL2 185 aa13.86□□□□□ -0.19
SCARB2-221ENST00000640341 PRKYO43930 277 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 SLITRK5O94991 958 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 C6P13671 934 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 CCT3P49368 545 aaKnown RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 HOXC5Q00444 222 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF33BQ06732 778 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 C1QTNF12Q5T7M4 302 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 VN1R5Q7Z5H4 357 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 C9orf43Q8TAL5 461 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 GATAD2BQ8WXI9 593 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 TRMT61BQ9BVS5 477 aaKnown RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 NDEL1Q9GZM8 345 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 ZCCHC3Q9NUD5 404 aaKnown RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 PLXNB3Q9ULL4 1909 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 CXCL10P02778 98 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 TSPAN19P0C672 248 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 BMPR1AP36894 532 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 PCBP3P57721 371 aaKnown RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 ZNF517Q6ZMY9 492 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 GRASPQ7Z6J2 395 aaPredicted RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 C12orf40Q86WS4 652 aa13.85□□□□□ -0.19
SCARB2-221ENST00000640341 MMAAQ8IVH4 418 aaKnown RBP13.85□□□□□ -0.19
SCARB2-221ENST00000640341 KRT78Q8N1N4 520 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms