RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CLEC1AQ8NC01 280 aa12.34□□□□□ -0.43
GTF3A-209ENST00000640289 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
GTF3A-209ENST00000640289 PTPMT1Q8WUK0 201 aaPredicted RBP12.34□□□□□ -0.43
GTF3A-209ENST00000640289 NUDT8Q8WV74 236 aa12.34□□□□□ -0.43
GTF3A-209ENST00000640289 TTC9Q92623 222 aa12.34□□□□□ -0.43
GTF3A-209ENST00000640289 CNRIP1Q96F85 164 aaPredicted RBP12.34□□□□□ -0.43
GTF3A-209ENST00000640289 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
GTF3A-209ENST00000640289 DGAT2Q96PD7 388 aa12.34□□□□□ -0.43
GTF3A-209ENST00000640289 ADAP2Q9NPF8 381 aa12.34□□□□□ -0.43
GTF3A-209ENST00000640289 ATP13A2Q9NQ11 1180 aa12.34□□□□□ -0.43
GTF3A-209ENST00000640289 FGFR1OP2Q9NVK5 253 aa12.34□□□□□ -0.43
GTF3A-209ENST00000640289 NOP53Q9NZM5 478 aaKnown RBP12.34□□□□□ -0.43
GTF3A-209ENST00000640289 EIF3LQ9Y262 564 aaKnown RBP12.34□□□□□ -0.43
GTF3A-209ENST00000640289 C17orf105B2RV13 164 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ITGB2P05107 769 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ITGAMP11215 1152 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 CPMP14384 443 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 TNNI3P19429 210 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ITGA3P26006 1051 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 PLIN5Q00G26 463 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 AIMP2Q13155 320 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ELAVL1Q15717 326 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 LSM12Q3MHD2 195 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 TMEM198Q66K66 360 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 OGFOD2Q6N063 350 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 LRRC34Q8IZ02 419 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ST13P4Q8IZP2 240 aaPredicted RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 GALNT16Q8N428 558 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 KRTCAP2Q8N6L1 136 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF321PQ8N8H1 164 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 RFWD2Q8NHY2 731 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ACTRT2Q8TDY3 377 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 RBM18Q96H35 190 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 MARK4Q96L34 752 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF681Q96N22 645 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 CCDC134Q9H6E4 229 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 NPHS2Q9NP85 383 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 MIEF1Q9NQG6 463 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 ASIC5Q9NY37 505 aa12.33□□□□□ -0.44
GTF3A-209ENST00000640289 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 WBP11Q9Y2W2 641 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 MAP1BP46821 2468 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 TPRP12270 2363 aaKnown RBP12.33□□□□□ -0.44
GTF3A-209ENST00000640289 HRKO00198 91 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 OR10H2O60403 315 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 TGDSO95455 350 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 VIMP08670 466 aaKnown RBP12.32□□□□□ -0.44
GTF3A-209ENST00000640289 CT62P0C5K7 136 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 SLC35E2P0CK97 266 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 PORP16435 677 aaPredicted RBP12.32□□□□□ -0.44
GTF3A-209ENST00000640289 ASMTP46597 345 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 IDH3AP50213 366 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 PGDP52209 483 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 POLE2P56282 527 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 NME5P56597 212 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 RHDQ02161 417 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 SF3A3Q12874 501 aaKnown RBP eCLIP12.32□□□□□ -0.44
GTF3A-209ENST00000640289 PDE7AQ13946 482 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 PLAG1Q6DJT9 500 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 KBTBD2Q8IY47 623 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 CCDC116Q8IYX3 515 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 LRRC25Q8N386 305 aaPredicted RBP12.32□□□□□ -0.44
GTF3A-209ENST00000640289 KIF2BQ8N4N8 673 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 APCDD1LQ8NCL9 501 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 FDCSPQ8NFU4 85 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 OR7A2PQ8NGA2 310 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 CEP70Q8NHQ1 597 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 M1APQ8TC57 530 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 NCLNQ969V3 563 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 ARHGAP9Q9BRR9 750 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 REEP4Q9H6H4 257 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 SLC35C2Q9NQQ7 365 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 EHD3Q9NZN3 535 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 DCTN4Q9UJW0 460 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 PSME2Q9UL46 239 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 CLCA3PQ9Y6N3 262 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF780BQ9Y6R6 833 aa12.32□□□□□ -0.44
GTF3A-209ENST00000640289 SYNDIG1LA6NDD5 238 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 GABRR3A8MPY1 467 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SCAMP2O15127 329 aaKnown RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 DDAH2O95865 285 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SERPINA7P05543 415 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 FAM87AP0C7U9 286 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 COX7A2P14406 83 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 CSNK2A2P19784 350 aaPredicted RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 NT5EP21589 574 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SOX18P35713 384 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 GPR143P51810 404 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 BIKQ13323 160 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF267Q14586 743 aaPredicted RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 TERF2Q15554 542 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 LTB4RQ15722 352 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 CEBPEQ15744 281 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 EXT1Q16394 746 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 MPEG1Q2M385 716 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ACAD11Q709F0 780 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SPATA19Q7Z5L4 167 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms