RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 SCAMP1O15126 338 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 NARSO43776 548 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 BRINP1O60477 761 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TFP02787 698 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ACAA1P09110 424 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 EDN3P14138 238 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 JAK3P52333 1124 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RPP30P78346 268 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 BLOC1S1P78537 153 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PTPN11Q06124 597 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PDZK1IP1Q13113 114 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CRHR2Q13324 411 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 OR2B11Q5JQS5 317 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 FAM74A1Q5RGS3 127 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 LHX8Q68G74 356 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PGBD2Q6P3X8 592 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 IL27RAQ6UWB1 636 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RBMS3Q6XE24 437 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 GDPGP1Q6ZNW5 385 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TMEM135Q86UB9 458 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 NAA40Q86UY6 237 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 DCUN1D3Q8IWE4 304 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 MCPH1Q8NEM0 835 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 MEGF10Q96KG7 1140 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CSPG4P5Q96PW8 444 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 IL4I1Q96RQ9 567 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PCYT2Q99447 389 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 SMAD5Q99717 465 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 NTMT1Q9BV86 223 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 EXTL2Q9UBQ6 330 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 AUP1Q9Y679 476 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 A0A1B0GTQ1 180 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ZCWPW2A0A1B0GU75 182 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 LRIT2A6NDA9 550 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ANXA2P2A6NMY6 339 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 C19orf81C9J6K1 198 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 M0R129 80 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TCAPO15273 167 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 AP2A1O95782 977 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CD2P06729 351 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 KLK3P07288 261 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 HIST1H2AGP0C0S8 130 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 HOXB6P17509 224 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 HIST1H2ADP20671 130 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 DRD5P21918 477 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ITGB8P26012 769 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RIDAP52758 137 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CAV3P56539 151 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RAB8AP61006 207 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 BTG1P62324 171 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CACNB2Q08289 660 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ITKQ08881 620 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 KRT33BQ14525 404 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 EXOC3L2Q2M3D2 409 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PABPC1L2AQ5JQF8 200 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TSTD2Q5T7W7 516 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CD276Q5ZPR3 534 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 HIST2H2AA3Q6FI13 130 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CEP68Q76N32 757 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 SHFQ7M4L6 423 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TSPAN33Q86UF1 283 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PDZD3Q86UT5 571 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TOMM5Q8N4H5 51 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 AVL9Q8NBF6 648 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RPLP0P6Q8NHW5 317 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 SCARB1Q8WTV0 552 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RAB7BQ96AH8 199 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PDLIM5Q96HC4 596 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 HIST1H2AHQ96KK5 128 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 OR2M2Q96R28 347 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 HIST1H2AJQ99878 128 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TMEM161AQ9NX61 479 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PPP4R1LQ9P1A2 415 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 GHRLQ9UBU3 117 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RPS6KA6Q9UK32 745 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 CLEC4AQ9UMR7 237 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RFXAPO00287 272 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 EEF1E1O43324 174 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PRSS23O95084 383 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 IRS1P35568 1242 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 MMP12P39900 470 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RFC3P40938 356 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 HSPA7P48741 367 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ZNF280AP59817 542 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 EIF4HQ15056 248 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 RBMS2Q15434 407 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 EIF2S3LQ2VIR3 472 aaKnown RBP6.8□□□□□ -1.32
NECAP1-213ENST00000638883 GFOD2Q3B7J2 385 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ZNF678Q5SXM1 525 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 TMEM192Q8IY95 271 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 DUSP18Q8NEJ0 188 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 B3GNT7Q8NFL0 401 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 PHOSPHO1Q8TCT1 267 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 UCN3Q969E3 161 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ZFP3Q96NJ6 502 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 OR52E6Q96RD3 313 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 B3GNT5Q9BYG0 378 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 ATXN3LQ9H3M9 355 aa6.8□□□□□ -1.32
NECAP1-213ENST00000638883 JPH1Q9HDC5 661 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms