RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 BEST1O76090 585 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 TCRBP04435 133 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DUX4L2P0CJ85 424 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DUX4L3P0CJ86 424 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DUX4L4P0CJ87 422 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DUX4L5P0CJ88 424 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DUX4L6P0CJ89 424 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DUX4L7P0CJ90 424 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 HNF1BP35680 557 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 HMGA2P52926 109 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 RPS14P62263 151 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 CYP4F8P98187 520 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 SLC14A1Q13336 389 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 EIF4EBP2Q13542 120 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 SMAD2Q15796 467 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 NTRK2Q16620 822 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 GSG1Q2KHT4 349 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 BHLHA9Q7RTU4 235 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 TAC4Q86UU9 113 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 JAZF1Q86VZ6 243 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PAQR7Q86WK9 346 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PNPLA1Q8N8W4 532 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 CDK15Q96Q40 435 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 GPR21Q99679 349 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 C7orf50Q9BRJ6 194 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 YIPF4Q9BSR8 244 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 SPATA5L1Q9BVQ7 753 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 NLNQ9BYT8 704 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 NKX6-2Q9C056 277 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 RLIMQ9NVW2 624 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 DUX4Q9UBX2 424 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PRKAG2Q9UGJ0 569 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PPIEQ9UNP9 301 aaKnown RBP11.45□□□□□ -0.58
CAPN3-221ENST00000638141 CORO2BQ9UQ03 480 aa11.45□□□□□ -0.58
CAPN3-221ENST00000638141 PAPPA2Q9BXP8 1791 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 C19orf81C9J6K1 198 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 NPIPB8E9PQR5 432 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 RFXANKO14593 260 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 ENTPD6O75354 484 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HRGP04196 525 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HIST1H2AGP0C0S8 130 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HAPLN1P10915 354 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-221ENST00000638141 BCKDHAP12694 445 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 DRD2P14416 443 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 TYRP14679 529 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HIST1H2ADP20671 130 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 PPIBP23284 216 aaKnown RBP11.44□□□□□ -0.58
CAPN3-221ENST00000638141 AHCYP23526 432 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 GABRA5P31644 462 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 SLC6A4P31645 630 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 PBX3P40426 434 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 CDKN2CP42773 168 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 LIMS1P48059 325 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 CRISP1P54107 249 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 VSX2P58304 361 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-221ENST00000638141 VGLL4Q14135 290 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HIST2H2AA3Q6FI13 130 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 C5orf46Q6UWT4 87 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 TMEM91Q6ZNR0 172 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 LAPTM4BQ86VI4 370 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 C12orf40Q86WS4 652 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 TRAPPC12Q8WVT3 735 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 SLC5A11Q8WWX8 675 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 CHFRQ96EP1 664 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 LRRC46Q96FV0 321 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HIST1H2AHQ96KK5 128 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 BBS4Q96RK4 519 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 TRIB3Q96RU7 358 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HIST1H2AJQ99878 128 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 BCL2L14Q9BZR8 327 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 HDHD2Q9H0R4 259 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 EVA1AQ9H8M9 152 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 UCK1Q9HA47 277 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 IMP3Q9NV31 184 aaKnown RBP11.44□□□□□ -0.58
CAPN3-221ENST00000638141 NLE1Q9NVX2 485 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-221ENST00000638141 ABT1Q9ULW3 272 aaKnown RBP11.44□□□□□ -0.58
CAPN3-221ENST00000638141 SNX11Q9Y5W9 270 aa11.44□□□□□ -0.58
CAPN3-221ENST00000638141 ANKDD1BA6NHY2 528 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 NCF1BA6NI72 391 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-221ENST00000638141 C2orf81A6NN90 581 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 NCF1CA8MVU1 366 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-221ENST00000638141 TMEM229AB2RXF0 380 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 LGALS8O00214 317 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 CLIC1O00299 241 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 SLC28A2O43868 658 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 PRMT3O60678 531 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 NDUFS3O75489 264 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 SOX30O94993 753 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 APOC3P02656 99 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 PKMP14618 531 aaKnown RBP11.43□□□□□ -0.58
CAPN3-221ENST00000638141 JUPP14923 745 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 PRPH2P23942 346 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 CNR2P34972 360 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 RFC3P40938 356 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 RFX3P48380 749 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 HNMTP50135 292 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 PSMD4P55036 377 aaKnown RBP11.43□□□□□ -0.58
CAPN3-221ENST00000638141 PRMT2P55345 433 aa11.43□□□□□ -0.58
CAPN3-221ENST00000638141 MTAPQ13126 283 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms