RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 FCRLAQ7L513 359 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 CPEB2Q7Z5Q1 589 aaKnown RBP4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 FBXW8Q8N3Y1 598 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 ZNF383Q8NA42 475 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC24A4Q8NFF2 622 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 RFT1Q96AA3 541 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 RBM41Q96IZ5 413 aaKnown RBP4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 ZNF354BQ96LW1 612 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 C16orf45Q96MC5 204 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 UPF3AQ9H1J1 476 aaKnown RBP4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 HIPK2Q9H2X6 1198 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 DPEP2Q9H4A9 486 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 VIPAS39Q9H9C1 493 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 GPN1Q9HCN4 374 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 HOXC10Q9NYD6 342 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 FBXL4Q9UKA2 621 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 PRDM4Q9UKN5 801 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 ELF5Q9UKW6 265 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 TPRP12270 2363 aaKnown RBP4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 SIP14410 1827 aa4.51□□□□□ -1.69
TRAPPC9-216ENST00000634178 CACNA1GO43497 2377 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SYNRGQ9UMZ2 1314 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CDK5RAP2Q96SN8 1893 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CHD8Q9HCK8 2581 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 IGHV4-61A0A0C4DH41 118 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 A0A1B0GUL7 405 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CFAP73A6NFT4 308 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 H0YIG0 161 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC28A1O00337 649 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 NDC80O14777 642 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TEX28O15482 410 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CABYRO75952 493 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TRIM16O95361 564 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC25A27O95847 323 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 IGHV4-59P01825 116 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 ATP1B1P05026 303 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SFTPBP07988 381 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 ETS1P14921 441 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 MYOGP15173 224 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 IL9P15248 144 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 GOT1P17174 413 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 UGT1A6P19224 532 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 NR1D1P20393 614 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 ACP1P24666 158 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 ITGA3P26006 1051 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 RBMS1P29558 406 aaKnown RBP4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SFNP31947 248 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CEACAM8P31997 349 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 RFC2P35250 354 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 NSFP46459 744 aaKnown RBP4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 THBS3P49746 956 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 DNA2P51530 1060 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CLCN4P51793 760 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SSTP61278 116 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 GSTO1P78417 241 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CDR2Q01850 454 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 ZC2HC1CQ53FD0 456 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 DNAJC21Q5F1R6 531 aaKnown RBP4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 PRSS57Q6UWY2 283 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 COX8CQ7Z4L0 72 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TAF8Q7Z7C8 310 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC37A3Q8NCC5 494 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 CCDC110Q8TBZ0 833 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 GANCQ8TET4 914 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TM9SF4Q92544 642 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 SEPT8Q92599 483 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 HAS2Q92819 552 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 FAM46BQ96A09 425 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 DTD2Q96FN9 168 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 LPAR4Q99677 370 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 UBAC1Q9BSL1 405 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 ATG10Q9H0Y0 220 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TRPV6Q9H1D0 765 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 C5orf66Q9H5L9 145 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 MARCH7Q9H992 704 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TBC1D13Q9NVG8 400 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TAS2R3Q9NYW6 316 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 TAAR2Q9P1P5 351 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 PARP14Q460N5 1801 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 GVINP1Q7Z2Y8 2422 aa4.5□□□□□ -1.69
TRAPPC9-216ENST00000634178 PRR23AA6NEV1 266 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 TLR4O00206 839 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 PSMD3O43242 534 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 EXTL3O43909 919 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 FGF17O60258 216 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 CIAO1O76071 339 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 PGK2P07205 417 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 ASGR1P07306 291 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 FRMD6-AS1P0C7T7 363 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 FGF3P11487 239 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 CYP3A5P20815 502 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 MARCKSP29966 332 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 HPDP32754 393 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 DUTP33316 252 aaKnown RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 NBL1P41271 181 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 SLC1A3P43003 542 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 NUMBP49757 651 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 GPC3P51654 580 aa4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 HNRNPFP52597 415 aaKnown RBP4.49□□□□□ -1.69
TRAPPC9-216ENST00000634178 KCNK10P57789 538 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms