RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HSD17B2P37059 387 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 MDH1P40925 334 aaKnown RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 EPS15P42566 896 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 PITPNBP48739 271 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 SNU13P55769 128 aaKnown RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 ERVK-16P61578 105 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 ASIC1P78348 528 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 PRKCEQ02156 737 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 TRDNQ13061 729 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 GPM6BQ13491 265 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 DPYSQ14117 519 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 GAMTQ14353 236 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 SIX1Q15475 284 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 DPYSL2Q16555 572 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 RBBP7Q16576 425 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 LRRC23Q53EV4 343 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 TTC27Q6P3X3 843 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 PRSS55Q6UWB4 352 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 RBM43Q6ZSC3 357 aaKnown RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 HOOK3Q86VS8 718 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 UNC5CLQ8IV45 518 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 SFRP1Q8N474 314 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 PDCL2Q8N4E4 241 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 OR9Q2Q8NGE9 314 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 URGCPQ8TCY9 931 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 EEF2KMTQ96G04 330 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 RMDN2Q96LZ7 410 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 FERMT1Q9BQL6 677 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 MGME1Q9BQP7 344 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 ERP44Q9BS26 406 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 RIBC2Q9H4K1 309 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 PKD2L2Q9NZM6 624 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 TMOD2Q9NZR1 351 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 CNIH4Q9P003 139 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 POLLQ9UGP5 575 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 PSME2Q9UL46 239 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 PLCL2Q9UPR0 1127 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 MRPS18CQ9Y3D5 142 aaKnown RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 WDR19Q8NEZ3 1342 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 BRD4O60885 1362 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 hCG_38984A0A1B0GV85 526 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 A0A1B0GWJ7 208 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 OOEPA6NGQ2 149 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 A8MVM7 634 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 F8VVB4 439 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 F8VWA3 439 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 SLC33A1O00400 549 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-229ENST00000621897 RASGRF2O14827 1237 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 NUDT21O43809 227 aaKnown RBP3.34□□□□□ -1.87
BRCA1-229ENST00000621897 YES1P07947 543 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 ZFYP08048 801 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-229ENST00000621897 FAM86B2P0C5J1 330 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC172P0C7W6 258 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 POLR2MP0CAP2 368 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 UROSP10746 265 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 ETS1P14921 441 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 TCF4P15884 667 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 CAPZA1P52907 286 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 CLDN17P56750 224 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 MZT1Q08AG7 82 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 ZNF273Q14593 569 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 FUT11Q495W5 492 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 FILIP1LQ4L180 1135 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 LBHQ53QV2 105 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-229ENST00000621897 SPANXN4Q5MJ08 99 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 NEK5Q6P3R8 708 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 MFSD7Q6UXD7 560 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 ISLR2Q6UXK2 745 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 SPATA19Q7Z5L4 167 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 ADCK2Q7Z695 626 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 KCNMB4Q86W47 210 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 SPATA24Q86W54 205 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 FAM219AQ8IW50 185 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 MFN1Q8IWA4 741 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 FGFRL1Q8N441 504 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC63Q8NA47 563 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 IQUBQ8NA54 791 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 OR52M1Q8NGK5 317 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 OR8K3Q8NH51 312 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.34□□□□□ -1.87
BRCA1-229ENST00000621897 EXT2Q93063 718 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 P2RX5Q93086 422 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 C11orf52Q96A22 123 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 TMEM186Q96B77 213 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 C8orf76Q96K31 380 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 GDAP1L1Q96MZ0 367 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 PSMB7Q99436 277 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 GAL3ST1Q99999 423 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 UBAC1Q9BSL1 405 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 TEX13AQ9BXU3 409 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-229ENST00000621897 FAM129AQ9BZQ8 928 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 FN3KQ9H479 309 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 SOHLH2Q9NX45 425 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 POLKQ9UBT6 870 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 KLK11Q9UBX7 282 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 TTC41PQ6P2S7 1318 aa3.34□□□□□ -1.87
BRCA1-229ENST00000621897 A0A087WV48 116 aa3.33□□□□□ -1.88
BRCA1-229ENST00000621897 GOLGA6L7A0A1B0GV03 622 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms