RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CNRIP1Q96F85 164 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF681Q96N22 645 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 NPAS2Q99743 824 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 NUF2Q9BZD4 464 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 WDR41Q9HAD4 459 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 MMP25Q9NPA2 562 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 MYNNQ9NPC7 610 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 MARCOQ9UEW3 520 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-217ENST00000621474 TMED5Q9Y3A6 229 aa13.36□□□□□ -0.27
CBWD3-217ENST00000621474 HRKO00198 91 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF195O14628 629 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 GUCY1B2O75343 617 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 DDAH2O95865 285 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ICAM2P13598 275 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 SOX11P35716 441 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 GSTM5P46439 218 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 CD97P48960 835 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ACTN3Q08043 901 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 EXT1Q16394 746 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 B3GNTL1Q67FW5 361 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 H3F3CQ6NXT2 135 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ST13P4Q8IZP2 240 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 SIRT6Q8N6T7 355 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF321PQ8N8H1 164 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 LSM14AQ8ND56 463 aaKnown RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 B3GNT7Q8NFL0 401 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 CKAP2Q8WWK9 683 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 PPP3R2Q96LZ3 170 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 MEAF6Q9HAF1 191 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF71Q9NQZ8 489 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 BAIAP2L1Q9UHR4 511 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 SYNDIG1LA6NDD5 238 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 C17orf105B2RV13 164 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 MAN1A2O60476 641 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 IGKV3-11P04433 115 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 IFNA16P05015 189 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 CT62P0C5K7 136 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 KITP10721 976 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 BCKDHAP12694 445 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 CPMP14384 443 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 DRD2P14416 443 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ALOX15P16050 662 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 DDCP20711 480 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ALDH9A1P49189 494 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 HEPACAMQ14CZ8 416 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 CEBPEQ15744 281 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ATP6AP1LQ52LC2 224 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 IGFL2Q6UWQ7 119 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 WDR75Q8IWA0 830 aaKnown RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 KIRREL3Q8IZU9 778 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 TMEM132CQ8N3T6 1108 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 OR4K14Q8NGD5 310 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 C9orf43Q8TAL5 461 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 PIWIL2Q8TC59 973 aaKnown RBP13.35□□□□□ -0.27
CBWD3-217ENST00000621474 ZNF721Q8TF20 911 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 TUBGCP3Q96CW5 907 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 C7orf26Q96N11 449 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 C1orf50Q9BV19 199 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 FAIM2Q9BWQ8 316 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 SLC25A18Q9H1K4 315 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 AKTIPQ9H8T0 292 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 MED4Q9NPJ6 270 aa13.35□□□□□ -0.27
CBWD3-217ENST00000621474 SDHDO14521 159 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 PRKNO60260 465 aaPredicted RBP13.34□□□□□ -0.27
CBWD3-217ENST00000621474 CLPSP04118 112 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 SLC35E2P0CK97 266 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 PIK3R1P27986 724 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 PTGER1P34995 402 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 XKP51811 444 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 PLIN5Q00G26 463 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 BIKQ13323 160 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 SPRED3Q2MJR0 410 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 VWA5B1Q5TIE3 1220 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 RGS9BPQ6ZS82 235 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 IKBIPQ70UQ0 350 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 LARP4Q71RC2 724 aaKnown RBP eCLIP13.34□□□□□ -0.27
CBWD3-217ENST00000621474 OR14A16Q8NHC5 309 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 CLHC1Q8NHS4 586 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 SUN3Q8TAQ9 357 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 SLC2A12Q8TD20 617 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 LRRC8CQ8TDW0 803 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 DOK4Q8TEW6 326 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 NCLNQ969V3 563 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 KLHL29Q96CT2 875 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
CBWD3-217ENST00000621474 DGAT2Q96PD7 388 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 EHD3Q9NZN3 535 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 PTGFRNQ9P2B2 879 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
CBWD3-217ENST00000621474 CFAP46Q8IYW2 2715 aa13.33□□□□□ -0.27
CBWD3-217ENST00000621474 TMEM200CA6NKL6 621 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 HDAC3O15379 428 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 ERAL1O75616 437 aaKnown RBP13.33□□□□□ -0.28
CBWD3-217ENST00000621474 C1QL1O75973 258 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 PRB1P04280 392 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 ATP1B1P05026 303 aa13.33□□□□□ -0.28
CBWD3-217ENST00000621474 GALNSP34059 522 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms