RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 OR7A17O14581 309 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 SMAD9O15198 467 aaKnown RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 HOXA9P31269 272 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 HTRA4P83105 476 aaPredicted RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 CDK6Q00534 326 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 IL10RBQ08334 325 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 MLC1Q15049 377 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 EIF4HQ15056 248 aaKnown RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 CDNFQ49AH0 187 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 REEP3Q6NUK4 255 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 DPY19L4Q7Z388 723 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 IQCHQ86VS3 1027 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 OR2T33Q8NG76 320 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 SLC35F5Q8WV83 523 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 PKP2Q99959 881 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 PPM1HQ9ULR3 514 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 NPC1O15118 1278 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 SLC31A1O15431 190 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TLX2O43763 284 aaPredicted RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 FADS1O60427 444 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 ENGP17813 658 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 L1CAMP32004 1257 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 RPS5P46782 204 aaKnown RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 GSK3BP49841 420 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF280AP59817 542 aaPredicted RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 PSPHP78330 225 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 ATXN7L3Q14CW9 347 aaPredicted RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 DUSP7Q16829 419 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 AVPI1Q5T686 147 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 FAM162BQ5T6X4 162 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TIFABQ6ZNK6 161 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 LILRB2Q8N423 598 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 DEFB119Q8N690 84 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 NSMAFQ92636 917 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF599Q96NL3 588 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TP63Q9H3D4 680 aaPredicted RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 ACTL8Q9H568 366 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 OR2S2Q9NQN1 319 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 DUS2Q9NX74 493 aaKnown RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TAS2R14Q9NYV8 317 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 UBE2J1Q9Y385 318 aaPredicted RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 HES2Q9Y543 173 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TIMM22Q9Y584 194 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 OR1F1O43749 312 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 OR4F21O95013 312 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 SCGB1D1O95968 90 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RANP62826 216 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 EMX2Q04743 252 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 DYRK1AQ13627 763 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 FXNQ16595 210 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 C6orf141Q5SZD1 244 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ZFP82Q8N141 532 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PLD5Q8N7P1 536 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 FANK1Q8TC84 345 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 GPR152Q8TDT2 470 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 GLYATL2Q8WU03 294 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PRRT1Q99946 306 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ABCG8Q9H221 673 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ZNF286AQ9HBT8 521 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 POPDC3Q9HBV1 291 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MRM3Q9HC36 420 aaKnown RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 FBXL3Q9UKT7 428 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RAI2Q9Y5P3 530 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ASTN1O14525 1302 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 E9PI62 339 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 BANF1O75531 89 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ADRA1BP35368 520 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RAP2BP61225 183 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 NPAS4Q8IUM7 802 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 CMTM1Q8IZ96 169 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 HOXB13Q92826 284 aaPredicted RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 NTAN1Q96AB6 310 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MROQ9BYG7 248 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ATG10Q9H0Y0 220 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MINDY3Q9H8M7 445 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 POU2F3Q9UKI9 436 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PCDHB14Q9Y5E9 798 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MYH1P12882 1939 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MYH2Q9UKX2 1941 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MYH4Q9Y623 1939 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 C2orf92A0A1B0GVN3 265 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 ADAM12O43184 909 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 PAGE1O75459 146 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MYF6P23409 242 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 THBS2P35442 1172 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 MAGEB1P43366 347 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RFX5P48382 616 aaPredicted RBP6.89□□□□□ -1.31
COLCA1-205ENST00000620864 TAS2R39P59534 338 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RELAQ04206 551 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 DUSP28Q4G0W2 176 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 DPY19L2P1Q6NXN4 242 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 CMIPQ8IY22 773 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 NIPA2Q8N8Q9 360 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 KCT2Q8NC54 265 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 DBF4BQ8NFT6 615 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 HSH2DQ96JZ2 352 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 DPYSL5Q9BPU6 564 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 CSF2P04141 144 aa6.89□□□□□ -1.31
COLCA1-205ENST00000620864 RPL13AP40429 203 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms