RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 VMP1Q96GC9 406 aa17.06■□□□□ 0.32
LITAF-220ENST00000620789 RBM18Q96H35 190 aaKnown RBP17.06■□□□□ 0.32
LITAF-220ENST00000620789 PELOQ9BRX2 385 aaKnown RBP17.06■□□□□ 0.32
LITAF-220ENST00000620789 C20orf27Q9GZN8 174 aa17.06■□□□□ 0.32
LITAF-220ENST00000620789 LRTM1Q9HBL6 345 aa17.06■□□□□ 0.32
LITAF-220ENST00000620789 C1orf109Q9NX04 203 aa17.06■□□□□ 0.32
LITAF-220ENST00000620789 ANAPC2Q9UJX6 822 aa17.06■□□□□ 0.32
LITAF-220ENST00000620789 CES1P1Q9UKY3 287 aa17.06■□□□□ 0.32
LITAF-220ENST00000620789 DLGAP4Q9Y2H0 992 aa17.06■□□□□ 0.32
LITAF-220ENST00000620789 CPAMD8Q8IZJ3 1885 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 SEC22BO75396 215 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 IL3P08700 152 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 SLC35E2P0CK97 266 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 PIK3R1P27986 724 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 CLCN2P51788 898 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 ZNF763Q0D2J5 394 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 BST1Q10588 318 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 KIAA0040Q15053 153 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 NADK2Q4G0N4 442 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 ABHD17BQ5VST6 288 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 FCRLBQ6BAA4 426 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 NOXRED1Q6NXP6 359 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 SLC5A8Q8N695 610 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 OR4K14Q8NGD5 310 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 NCLNQ969V3 563 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 PPWD1Q96BP3 646 aaKnown RBP17.05■□□□□ 0.32
LITAF-220ENST00000620789 ZNF354BQ96LW1 612 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 SORT1Q99523 831 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.05■□□□□ 0.32
LITAF-220ENST00000620789 RAP2CQ9Y3L5 183 aa17.05■□□□□ 0.32
LITAF-220ENST00000620789 POLR3HQ9Y535 204 aaPredicted RBP17.05■□□□□ 0.32
LITAF-220ENST00000620789 HEMK1Q9Y5R4 338 aaPredicted RBP17.05■□□□□ 0.32
LITAF-220ENST00000620789 TRBV11-1A0A0K0K1C0 115 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 HMGB1P1B2RPK0 211 aaPredicted RBP17.04■□□□□ 0.32
LITAF-220ENST00000620789 LSM1O15116 133 aaKnown RBP17.04■□□□□ 0.32
LITAF-220ENST00000620789 DYRK3O43781 588 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 OR10H2O60403 315 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 SKAP2O75563 359 aaPredicted RBP17.04■□□□□ 0.32
LITAF-220ENST00000620789 DDAH2O95865 285 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 DRD2P14416 443 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 ALDH9A1P49189 494 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 HEPACAMQ14CZ8 416 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 XKR7Q5GH72 579 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 ACER2Q5QJU3 275 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 DGAT2L6Q6ZPD8 337 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 CRLF3Q8IUI8 442 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 RAB3IL1Q8TBN0 382 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 SLC2A12Q8TD20 617 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 NPAS2Q99743 824 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 CCT7Q99832 543 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 MFRPQ9BY79 579 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 DEFB126Q9BYW3 111 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 OR8D2Q9GZM6 311 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
LITAF-220ENST00000620789 HEY2Q9UBP5 337 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 HAO1Q9UJM8 370 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 ZNF223Q9UK11 482 aaPredicted RBP17.04■□□□□ 0.32
LITAF-220ENST00000620789 PSME2Q9UL46 239 aa17.04■□□□□ 0.32
LITAF-220ENST00000620789 UQCRHLA0A096LP55 91 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 A0A1W2PS29 197 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 SUV39H1O43463 412 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 GALNSP34059 522 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 XKP51811 444 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 RPL38P63173 70 aaKnown RBP17.03■□□□□ 0.32
LITAF-220ENST00000620789 MEP1AQ16819 746 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 SPRED3Q2MJR0 410 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 COLEC12Q5KU26 742 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 SLC6A19Q695T7 634 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 KIRREL3Q8IZU9 778 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 LGI4Q8N135 537 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 OR1N1Q8NGS0 311 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.03■□□□□ 0.32
LITAF-220ENST00000620789 PNPLA2Q96AD5 504 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 KLHL29Q96CT2 875 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 FCRL1Q96LA6 429 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 RNF32Q9H0A6 362 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 MYNNQ9NPC7 610 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 PFDN4Q9NQP4 134 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 STMN3Q9NZ72 180 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 COPS7AQ9UBW8 275 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 B3GNT3Q9Y2A9 372 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 WBP11Q9Y2W2 641 aaKnown RBP17.03■□□□□ 0.32
LITAF-220ENST00000620789 TMED5Q9Y3A6 229 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 CSAG2Q9Y5P2 127 aa17.03■□□□□ 0.32
LITAF-220ENST00000620789 ZNF462Q96JM2 2506 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 DYTNA2CJ06 578 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 MAN1A2O60476 641 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 ERAL1O75616 437 aaKnown RBP17.02■□□□□ 0.32
LITAF-220ENST00000620789 WDPCPO95876 746 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 CPMP14384 443 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 PORP16435 677 aaPredicted RBP17.02■□□□□ 0.32
LITAF-220ENST00000620789 RPL14P50914 215 aaKnown RBP17.02■□□□□ 0.32
LITAF-220ENST00000620789 ARG2P78540 354 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 ZNF750Q32MQ0 723 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 GALNTL6Q49A17 601 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 RFTN2Q52LD8 501 aaPredicted RBP17.02■□□□□ 0.32
LITAF-220ENST00000620789 ATG16L1Q676U5 607 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 Q6ZS92 163 aa17.02■□□□□ 0.32
LITAF-220ENST00000620789 IKBIPQ70UQ0 350 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms