RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PIWIL3Q7Z3Z3 882 aaKnown RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 ACOT4Q8N9L9 421 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 SETD9Q8NE22 299 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 PHF10Q8WUB8 498 aaKnown RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 OR5P2Q8WZ92 322 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 BMFQ96LC9 184 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 GABRG3Q99928 467 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 SERHL2Q9H4I8 314 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 TMEM38AQ9H6F2 299 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 SELENONQ9NZV5 590 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 A0A0J9YVX5 310 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 A0A1W2PR48 441 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 GSAPA4D1B5 854 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 POLR2CP19387 275 aaPredicted RBP11.75□□□□□ -0.53
CIITA-212ENST00000618207 MAGP20916 626 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 PSMB9P28065 219 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 KRT20P35900 424 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 ENTPD1P49961 510 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 RBBP4Q09028 425 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 HTR4Q13639 388 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 PUM1Q14671 1186 aaKnown RBP eCLIP11.75□□□□□ -0.53
CIITA-212ENST00000618207 AGERQ15109 404 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 FAAH2Q6GMR7 532 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 AMIGO1Q86WK6 493 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 TMEFF1Q8IYR6 380 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 MS4A6EQ96DS6 147 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 CSF3RQ99062 836 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 OR51I1Q9H343 314 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 ZNF624Q9P2J8 865 aaPredicted RBP11.75□□□□□ -0.53
CIITA-212ENST00000618207 APOBEC3BQ9UH17 382 aaKnown RBP11.75□□□□□ -0.53
CIITA-212ENST00000618207 ITGB1BP2Q9UKP3 347 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 GPR89AB7ZAQ6 455 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 HMGN4O00479 90 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 CPNE6O95741 557 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 MT-ND2P03891 347 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 EIF2S1P05198 315 aaKnown RBP11.75□□□□□ -0.53
CIITA-212ENST00000618207 GPR89BP0CG08 455 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 NR2F1P10589 423 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 GSTM2P28161 218 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 HTR1BP28222 390 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 RYKP34925 604 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 TPMTP51580 245 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 LIM2P55344 173 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 PCBP4P57723 403 aaKnown RBP11.75□□□□□ -0.53
CIITA-212ENST00000618207 BTN3A2P78410 334 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 GRSF1Q12849 480 aaKnown RBP eCLIP11.75□□□□□ -0.53
CIITA-212ENST00000618207 HYAL2Q12891 473 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 TMEM107Q6UX40 140 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 P3H2Q8IVL5 708 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 GEMIN6Q8WXD5 167 aaKnown RBP11.75□□□□□ -0.53
CIITA-212ENST00000618207 NEURL3Q96EH8 262 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 EPYCQ99645 322 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 FUNDC2Q9BWH2 189 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 GABARAPL1Q9H0R8 117 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 SRMSQ9H3Y6 488 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 EPS8L2Q9H6S3 715 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 SLC35C2Q9NQQ7 365 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 NDRG4Q9ULP0 352 aaKnown RBP11.75□□□□□ -0.53
CIITA-212ENST00000618207 PCDHGA6Q9Y5G7 932 aa11.75□□□□□ -0.53
CIITA-212ENST00000618207 A0A0A6YYD5 115 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 ZNF860A6NHJ4 632 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 CLEC3AO75596 197 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 SOX14O95416 240 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 IFNW1P05000 195 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 HIST1H1TP22492 207 aaPredicted RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 DCKP27707 260 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 OLR1P78380 273 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 MVKQ03426 396 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 MAD2L1BPQ15013 274 aaPredicted RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 ZC3H12BQ5HYM0 836 aaKnown RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 SAXO2Q658L1 398 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 MTSS1LQ765P7 747 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 OR4N5Q8IXE1 308 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 ENTHD1Q8IYW4 607 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 KAT2AQ92830 837 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 NACC2Q96BF6 587 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 C16orf58Q96GQ5 468 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 TCEAL2Q9H3H9 227 aaPredicted RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 DDX31Q9H8H2 851 aaKnown RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 SCN3BQ9NY72 215 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 SEC14L3Q9UDX4 400 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 CD207Q9UJ71 328 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.74□□□□□ -0.53
CIITA-212ENST00000618207 PRAMEF27A3QJZ7 478 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 ZW10O43264 779 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 RECKO95980 971 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 CHRM5P08912 532 aaPredicted RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 PVRP15151 417 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 CCNA2P20248 432 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 CMPK1P30085 196 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 GP2P55259 537 aaKnown RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 PCBP3P57721 371 aaKnown RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 PRRT3Q5FWE3 981 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 CRB2Q5IJ48 1285 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 C11orf74Q86VG3 221 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 MEX3DQ86XN8 651 aaKnown RBP11.74□□□□□ -0.53
CIITA-212ENST00000618207 LACC1Q8IV20 430 aa11.74□□□□□ -0.53
CIITA-212ENST00000618207 AQP11Q8NBQ7 271 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms