RNA–Protein interactions for RNA: ENST00000617719.4

ATXN3-251, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-251ENST00000617719 GPATCH2LQ9NWQ4 482 aa4.37□□□□□ -1.71
ATXN3-251ENST00000617719 NLGN3Q9NZ94 848 aa4.37□□□□□ -1.71
ATXN3-251ENST00000617719 IFNKQ9P0W0 207 aa4.37□□□□□ -1.71
ATXN3-251ENST00000617719 SLC17A6Q9P2U8 582 aa4.37□□□□□ -1.71
ATXN3-251ENST00000617719 B3GNT3Q9Y2A9 372 aa4.37□□□□□ -1.71
ATXN3-251ENST00000617719 PCDHA3Q9Y5H8 950 aa4.37□□□□□ -1.71
ATXN3-251ENST00000617719 TDRD6O60522 2096 aaKnown RBP4.37□□□□□ -1.71
ATXN3-251ENST00000617719 IGF2RP11717 2491 aa4.37□□□□□ -1.71
ATXN3-251ENST00000617719 LRRK1Q38SD2 2015 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 LAMA5O15230 3695 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 NCF1BA6NI72 391 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 C3orf70A6NLC5 250 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 NCF1CA8MVU1 366 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 C2orf74A8MZ97 194 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ZNF879B4DU55 563 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 LMO7DNF2Z398 122 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 H0YJX3 145 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 KPNA4O00629 521 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 FRS3O43559 492 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 GCATO75600 419 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 CBR3O75828 277 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PROSCO94903 275 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SEMA3DO95025 777 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 KRT16P08779 473 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 CD48P09326 243 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 H2AFZP0C0S5 128 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 NR1D1P20393 614 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TEAD1P28347 426 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SPAM1P38567 509 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 MMP12P39900 470 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 WNT5AP41221 380 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SLC15A1P46059 708 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 RPL5P46777 297 aaKnown RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SLC6A9P48067 706 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ALDH3A2P51648 485 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ARHGDIAP52565 204 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 AP1S1P61966 158 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 RPP30P78346 268 aaKnown RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 IFITM2Q01629 132 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 DSC2Q02487 901 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SRSF4Q08170 494 aaKnown RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 GALNT2Q10471 571 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SLC10A2Q12908 348 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 BAMBIQ13145 260 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TARDBPQ13148 414 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SNTA1Q13424 505 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 DPYSL3Q14195 570 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PDK2Q15119 407 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TAZQ16635 292 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 CDKN3Q16667 212 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ZNF829Q3KNS6 432 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 GALNTL6Q49A17 601 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PXDC1Q5TGL8 231 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 LRRC38Q5VT99 294 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PTRHD1Q6GMV3 140 aaKnown RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ZNF788Q6ZQV5 615 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 FAM47EQ6ZV65 393 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 H2AFVQ71UI9 128 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 DPPA4Q7L190 304 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TECPR1Q7Z6L1 1165 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PARGQ86W56 976 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 DENND6AQ8IWF6 608 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 RYBPQ8N488 228 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 FAM109AQ8N4B1 249 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PQLC3Q8N755 202 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PPM1NQ8N819 430 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ZNF321PQ8N8H1 164 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PSD4Q8NDX1 1056 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ZNF548Q8NEK5 533 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 POC1BQ8TC44 478 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 HEXDCQ8WVB3 486 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PIH1D2Q8WWB5 315 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 HDAC2Q92769 488 aaKnown RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TADA1Q96BN2 335 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 KLHL29Q96CT2 875 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 LRRC39Q96DD0 335 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SCRN2Q96FV2 425 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ZNF486Q96H40 463 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 APOLD1Q96LR9 279 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TMEM237Q96Q45 408 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PANX2Q96RD6 677 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 MCCC1Q96RQ3 725 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PKP4Q99569 1192 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 CHP1Q99653 195 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 FERMT1Q9BQL6 677 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 APOOQ9BUR5 198 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 SARGQ9BW04 601 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TRIM2Q9C040 744 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 HOXD1Q9GZZ0 328 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 MYLK2Q9H1R3 596 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 DCLRE1BQ9H816 532 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 TRNAU1APQ9NX07 287 aaKnown RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 NCKIPSDQ9NZQ3 722 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 ANAPC7Q9UJX3 599 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 PACSIN2Q9UNF0 486 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 WBP11Q9Y2W2 641 aaKnown RBP4.36□□□□□ -1.71
ATXN3-251ENST00000617719 GMPPBQ9Y5P6 360 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 CELSR3Q9NYQ7 3312 aa4.36□□□□□ -1.71
ATXN3-251ENST00000617719 APC2O95996 2303 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms