RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 ADAM17P78536 824 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 ELOAQ14241 798 aaKnown RBP17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 UGT3A2Q3SY77 523 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 BLOC1S3Q6QNY0 202 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 ZSWIM9Q86XI8 627 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 CHCHD4Q8N4Q1 142 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 CD200R1Q8TD46 325 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 FBXL8Q96CD0 374 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 TRMT2BQ96GJ1 504 aaKnown RBP17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 MT-ND5P03915 603 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 LAMP1P11279 417 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 ETFAP13804 333 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 AK4P27144 223 aaPredicted RBP17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 OR2B6P58173 313 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 TAS2R38P59533 333 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 DCDC1P59894 354 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 KCNAB2Q13303 367 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 LRIT3Q3SXY7 679 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 ULK3Q6PHR2 472 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 ZSCAN4Q8NAM6 433 aaPredicted RBP17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 MDGA1Q8NFP4 955 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 TMEM80Q96HE8 168 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 USP3Q9Y6I4 520 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 SEC14L5O43304 696 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 PSKH1P11801 424 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 PGCP20142 388 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 RORAP35398 523 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 CRYZQ08257 329 aaKnown RBP17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 TYSND1Q2T9J0 566 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 NADK2Q4G0N4 442 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 C7orf57Q8NEG2 295 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 OR56A3Q8NH54 315 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 SRA1Q9HD15 236 aaKnown RBP17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 PTTG2Q9NZH5 202 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 PCDHGB2Q9Y5G2 931 aa17.69■□□□□ 0.42
AC008878.3-201ENST00000617428 KDM4BO94953 1096 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 ARHGAP12Q8IWW6 846 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 DNMT3BQ9UBC3 853 aaKnown RBP17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 LRRC42Q9Y546 428 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 HSPA12AO43301 675 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 CDRT1O95170 752 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 HLA-FP30511 346 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 FAM189BP81408 668 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 OR2T33Q8NG76 320 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 OR7G3Q8NG95 312 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 PIP5K1AQ99755 562 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 CCDC106Q9BWC9 280 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 CHIAQ9BZP6 476 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 ANHXE9PGG2 379 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 RFXAPO00287 272 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 SLC2A2P11168 524 aaPredicted RBP17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 C4orf46Q504U0 113 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 CARD17Q5XLA6 110 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 LARP4Q71RC2 724 aaKnown RBP eCLIP17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 SNX29P2Q8IUI4 249 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 ISG20Q96AZ6 181 aaKnown RBP17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 FAM189A1O60320 539 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 GCGRP47871 477 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 GRIK2Q13002 908 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 ZBED5Q49AG3 693 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 SCGB2B2Q4G0G5 96 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 ZNF613Q6PF04 617 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 C16orf78Q8WTQ4 265 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 APIPQ96GX9 242 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 TMEM41AQ96HV5 264 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 SMIM14Q96QK8 99 aa17.68■□□□□ 0.42
AC008878.3-201ENST00000617428 C5orf51A6NDU8 294 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 CELP19835 753 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 HTR1EP28566 365 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 GJA4P35212 333 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 CTBP2P56545 445 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 ACY1Q03154 408 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 EXOC3L2Q2M3D2 409 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 SLC36A3Q495N2 470 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 SCAMP2O15127 329 aaKnown RBP17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 PPM1BO75688 479 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 RPS3P23396 243 aaKnown RBP eCLIP17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 FCHO2Q0JRZ9 810 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 GAS6Q14393 721 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 CCDC80Q76M96 950 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 KCNK13Q9HB14 408 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 TIGARQ9NQ88 270 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 POLE3Q9NRF9 147 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 FAM78AQ5JUQ0 283 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 DPPA4Q7L190 304 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 GALNT15Q8N3T1 639 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 ZNF784Q8NCA9 323 aaPredicted RBP17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 RHBDF1Q96CC6 855 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 SAGE1Q9NXZ1 904 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 PMF1-BGLAPU3KQ54 211 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 FAAHO00519 579 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 GPR39O43194 453 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 EEDO75530 441 aaKnown RBP17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 SOX30O94993 753 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 AK1P00568 194 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 P04436 131 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 TIMP2P16035 220 aa17.67■□□□□ 0.42
AC008878.3-201ENST00000617428 MAOBP27338 520 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms