RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 IRAK1P51617 712 aa12.15□□□□□ -0.47
TCF4-248ENST00000616053 GALNT12Q8IXK2 581 aa12.15□□□□□ -0.47
TCF4-248ENST00000616053 ZNF559Q9BR84 538 aa12.15□□□□□ -0.47
TCF4-248ENST00000616053 GPR62Q9BZJ7 368 aa12.15□□□□□ -0.47
TCF4-248ENST00000616053 SNX10Q9Y5X0 201 aa12.15□□□□□ -0.47
TCF4-248ENST00000616053 NPIPA5A0A0B4J1W7 369 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 SLC35F4A4IF30 521 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 NPIPA7E9PJI5 369 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 OAS1P00973 400 aaKnown RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 NPIPA8P0DM63 369 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 SLC1A3P43003 542 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 TXNDC8Q6A555 127 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 DMBX1Q8NFW5 382 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 SMIM28A0A1B0GU29 152 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 MYOCOSA0A1B0GUC4 107 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 MEIOCA2RUB1 952 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 PRRG2O14669 202 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 ZNF44P15621 663 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 IL10RBQ08334 325 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 GRM7Q14831 915 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 HERC3Q15034 1050 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 FAM174BQ3ZCQ3 159 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 FKBP1CQ5VVH2 108 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 CERS5Q8N5B7 392 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 ASCC1Q8N9N2 400 aaKnown RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 CMTM2Q8TAZ6 248 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 THAP4Q8WY91 577 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 PSMG2Q969U7 264 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 ETAA1Q9NY74 926 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 FZD10Q9ULW2 581 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 NPC1O15118 1278 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 PROM1O43490 865 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 SHOX2O60902 331 aaPredicted RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 SEMA4FO95754 770 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 TSPAN15O95858 294 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 TSHRP16473 764 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 IDH3GP51553 393 aaPredicted RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 KIAA1211LQ6NV74 962 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 TMEM130Q8N3G9 435 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 METTL25Q8N6Q8 603 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 CSNK1A1LQ8N752 337 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 C9orf43Q8TAL5 461 aaPredicted RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 TMEM43Q9BTV4 400 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 NMUR2Q9GZQ4 415 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 CHD4Q14839 1912 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 G6PDP11413 515 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 FRKP42685 505 aaPredicted RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 PITPNBP48739 271 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 UGCGQ16739 394 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 OR51Q1Q8NH59 317 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 HDAC7Q8WUI4 952 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 CORO2AQ92828 525 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 UPRTQ96BW1 309 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 DOHHQ9BU89 302 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 NDRG3Q9UGV2 375 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 GOLT1BQ9Y3E0 138 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 ARHGEF40Q8TER5 1519 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 A0A1W2PPM1 405 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 NRP1O14786 923 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 CHRM4P08173 479 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 FNTBP49356 437 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 LASP1Q14847 261 aaKnown RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 FAM26DQ5JW98 314 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 LPCAT4Q643R3 524 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 CEACAM20Q6UY09 585 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 EGLN1Q9GZT9 426 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 QPCTLQ9NXS2 382 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 PLEKHM1Q9Y4G2 1056 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 PSMD10O75832 226 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 CLEC6AQ6EIG7 209 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 METTL2BQ6P1Q9 378 aaKnown RBP12.14□□□□□ -0.47
TCF4-248ENST00000616053 PLEKHG7Q6ZR37 379 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 DCUN1D3Q8IWE4 304 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 TMEM203Q969S6 136 aa12.14□□□□□ -0.47
TCF4-248ENST00000616053 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 CD300LBA8K4G0 201 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 B3GALNT1O75752 331 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 MPSTP25325 297 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 IL2RGP31785 369 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 SOX9P48436 509 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 PTDSS1P48651 473 aaKnown RBP12.13□□□□□ -0.47
TCF4-248ENST00000616053 HOXA1P49639 335 aaPredicted RBP12.13□□□□□ -0.47
TCF4-248ENST00000616053 GRB2P62993 217 aaKnown RBP12.13□□□□□ -0.47
TCF4-248ENST00000616053 HHEXQ03014 270 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 ADAM15Q13444 863 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 NAPRTQ6XQN6 538 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 ULBP3Q9BZM4 244 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 SMG9Q9H0W8 520 aaKnown RBP12.13□□□□□ -0.47
TCF4-248ENST00000616053 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 NSUN3Q9H649 340 aaKnown RBP12.13□□□□□ -0.47
TCF4-248ENST00000616053 ZNF705FA8MVS1 300 aaPredicted RBP12.13□□□□□ -0.47
TCF4-248ENST00000616053 CCL22O00626 93 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 SCELO95171 688 aa12.13□□□□□ -0.47
TCF4-248ENST00000616053 ZNF705DP0CH99 300 aaPredicted RBP12.13□□□□□ -0.47
TCF4-248ENST00000616053 ZNF705BP0CI00 300 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms