RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ADIPOR2Q86V24 386 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 HORMAD2Q8N7B1 307 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 AQP11Q8NBQ7 271 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 OR52P1PQ8NH57 321 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 UBASH3BQ8TF42 649 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 WBP2Q969T9 261 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 TRNT1Q96Q11 434 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 RBP7Q96R05 134 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ATOH8Q96SQ7 321 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ALOXE3Q9BYJ1 711 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 EHD1Q9H4M9 534 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC39A1Q9NY26 324 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 OAZ3Q9UMX2 235 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 HCN4Q9Y3Q4 1203 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 A0A0A6YYC8 382 aaPredicted RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 WASHC1A8K0Z3 465 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 H0YC42 278 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 I3L1I5 382 aaPredicted RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 RDH16O75452 317 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 KLHL18O94889 574 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 DCNP07585 359 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 ATP12AP54707 1039 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 NNATQ16517 81 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 SWT1Q5T5J6 900 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 IER5LQ5T953 404 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 DENND5AQ6IQ26 1287 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 MZT2BQ6NZ67 158 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 WASH2PQ6VEQ5 465 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 SPEM1Q8N4L4 309 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 MINDY1Q8N5J2 469 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 GNPDA2Q8TDQ7 276 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ASB15Q8WXK1 588 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC6A17Q9H1V8 727 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 GALNT8Q9NY28 637 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 RSL24D1Q9UHA3 163 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 COMMD3-BMI1R4GMX3 469 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 A0A1B0GVT2 93 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 GPR37L1O60883 481 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PPM1BO75688 479 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 SERPINA3P01011 423 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 DBIP07108 87 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 GNALP38405 381 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PDX1P52945 283 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 FAM69BQ5VUD6 431 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 ERMP1Q7Z2K6 904 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC44A3Q8N4M1 653 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 GATSQ8NAP1 163 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 UXS1Q8NBZ7 420 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 OR13H1Q8NG92 308 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 FCGR1BQ92637 280 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 COPS4Q9BT78 406 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 DOHHQ9BU89 302 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 ACTRT3Q9BYD9 372 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.99□□□□□ -0.973e-6■■■■□ 21
CLTCL1-208ENST00000615606 ACOT7O00154 380 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 DHRS4L1P0CG22 281 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 CCR5P51681 352 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 GPR143P51810 404 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 MERTKQ12866 999 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PUM1Q14671 1186 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 TLR1Q15399 786 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 KLHL17Q6TDP4 642 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 RBM44Q6ZP01 1051 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 RFLNAQ6ZTI6 216 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 LARP4Q71RC2 724 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 ACOT4Q8N9L9 421 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 OR52N2Q8NGI0 321 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 LRRC46Q96FV0 321 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 H3BNX3 289 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 LAMP1P11279 417 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 DDCP20711 480 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 KDELR2P33947 212 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 MAGEA3P43357 314 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 MAZP56270 477 aaKnown RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 MFSD2AQ8NA29 543 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 TOR1AIP2Q8NFQ8 470 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 OSTF1Q92882 214 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 FGF14Q92915 247 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 MS4A4EQ96PG1 132 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 ETAA1Q9NY74 926 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 GRHPRQ9UBQ7 328 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 BTBD3Q9Y2F9 522 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 NRXN2Q9P2S2 1712 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 BLOC1S5-TXNDC5H3BN57 136 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 FNTBP49356 437 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 GBX2P52951 348 aaPredicted RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 RASGEF1BQ0VAM2 473 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PON3Q15166 354 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 RGS21Q2M5E4 152 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 LRRC69Q6ZNQ3 347 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 UBE2J2Q8N2K1 259 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF433Q8N7K0 673 aaPredicted RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 CDRT4Q8N9R6 151 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 C9orf43Q8TAL5 461 aaPredicted RBP8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 ECHDC3Q96DC8 303 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 HS6ST2Q96MM7 605 aa8.99□□□□□ -0.97
CLTCL1-208ENST00000615606 PKMYT1Q99640 499 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms