RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 OR5AK3PQ8NH89 298 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 ZNF675Q8TD23 568 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 PDXPQ96GD0 296 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 MAPKAP1Q9BPZ7 522 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 SLC17A9Q9BYT1 436 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 ZDHHC5Q9C0B5 715 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 SLC6A16Q9GZN6 736 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 NXF2Q9GZY0 626 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 WDR26Q9H7D7 661 aa13.97□□□□□ -0.17
CDH1-213ENST00000612417 ZBTB20Q9HC78 741 aaPredicted RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 NDRG2Q9UN36 371 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 WBP11Q9Y2W2 641 aaKnown RBP13.97□□□□□ -0.17
CDH1-213ENST00000612417 SH3D21A4FU49 640 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 TBX19O60806 448 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 SEMA3DO95025 777 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 GADD45AP24522 165 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 DSTNP60981 165 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 OLR1P78380 273 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 NFE2L1Q14494 772 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 EOGTQ5NDL2 527 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 PRAMEF14Q5SWL7 426 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 AGAP7PQ5VUJ5 663 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 PRAMEF13Q5VWM6 474 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 SLC9B2Q86UD5 537 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 LACC1Q8IV20 430 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 ZNF740Q8NDX6 193 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 C9orf43Q8TAL5 461 aaPredicted RBP13.96□□□□□ -0.17
CDH1-213ENST00000612417 APOBEC4Q8WW27 367 aaKnown RBP13.96□□□□□ -0.17
CDH1-213ENST00000612417 CRELD1Q96HD1 420 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 IMPAD1Q9NX62 359 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 GPR83Q9NYM4 423 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 SCML1Q9UN30 329 aa13.96□□□□□ -0.17
CDH1-213ENST00000612417 FAM32AQ9Y421 112 aaKnown RBP13.96□□□□□ -0.17
CDH1-213ENST00000612417 TRBC2A0A5B9 178 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 J3KTA2 159 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 TAF4O00268 1085 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 PCDH17O14917 1159 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 MPZL2O60487 215 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 CCNB2O95067 398 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 GADD45GO95257 159 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 RPLP0P05388 317 aaKnown RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 GLULP15104 373 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 TOR1AIP1Q5JTV8 583 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 ZNF770Q6IQ21 691 aaPredicted RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 REEP3Q6NUK4 255 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 C11orf96Q7Z7L8 435 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 LRRTM4Q86VH4 590 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 AMZ2Q86W34 360 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 KRT78Q8N1N4 520 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 NATD1Q8N6N6 113 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 PSMA8Q8TAA3 256 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 UTP15Q8TED0 518 aaKnown RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 NEURL3Q96EH8 262 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 C1QTNF7Q9BXJ2 289 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 C1QTNF2Q9BXJ5 285 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 NLNQ9BYT8 704 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 OR52A5Q9H2C5 316 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 AMBNQ9NP70 447 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 MIEF1Q9NQG6 463 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 PHPT1Q9NRX4 125 aaPredicted RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 AHSPQ9NZD4 102 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 CNOT2Q9NZN8 540 aaKnown RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 CCDC59Q9P031 241 aaKnown RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 FTSJ1Q9UET6 329 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 PCDHGA3Q9Y5H0 932 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 PCYT1BQ9Y5K3 369 aaPredicted RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 ISPDA4D126 451 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 ZAR1LA6NP61 321 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 SLC31A1O15431 190 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 IFNW1P05000 195 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 STSP08842 583 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 ERGP11308 486 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 SOAT1P35610 550 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 NUDT6P53370 316 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 CDC42P60953 191 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 ST3GAL4Q11206 333 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 AGERQ15109 404 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 PTGES3Q15185 160 aaKnown RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 SAXO2Q658L1 398 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 NCCRP1Q6ZVX7 275 aaPredicted RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 PDZD3Q86UT5 571 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 STX19Q8N4C7 294 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 AMER2Q8N7J2 671 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 LMNTD1Q8N9Z9 388 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 TP53I13Q8NBR0 393 aaPredicted RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 FLCNQ8NFG4 579 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 KBTBD8Q8NFY9 601 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 RAD51AP1Q96B01 352 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 MRGPRX1Q96LB2 322 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 CDCA4Q9BXL8 241 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 TEX101Q9BY14 249 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 ZNF717Q9BY31 904 aaPredicted RBP13.95□□□□□ -0.18
CDH1-213ENST00000612417 RHBGQ9H310 441 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 CXorf36Q9H7Y0 433 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 A4GALTQ9NPC4 353 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 FZD3Q9NPG1 666 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 RAB23Q9ULC3 237 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 PNMA8BQ9ULN7 279 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms