RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 F11P03951 625 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 SRPRAP08240 638 aaKnown RBP6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 HPGDP15428 266 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF8P17098 575 aaPredicted RBP6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 IMPA1P29218 277 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 HOXC5Q00444 222 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 ID2Q02363 134 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 EIF4EBP2Q13542 120 aaPredicted RBP6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 MFSD4BQ5TF39 518 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 ALG1LQ6GMV1 187 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 RNF44Q7L0R7 432 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 NRARPQ7Z6K4 114 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 GALNT13Q8IUC8 556 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 MMP21Q8N119 569 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF433Q8N7K0 673 aaPredicted RBP6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 SLAIN1Q8ND83 568 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 FLCNQ8NFG4 579 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 PJA1Q8NG27 643 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 OR8J2Q8NGG1 315 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 OR14C36Q8NHC7 312 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 SMPDL3AQ92484 453 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF514Q96K75 400 aaPredicted RBP6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 BCL7BQ9BQE9 202 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 OR51I1Q9H343 314 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 BEX1Q9HBH7 125 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 NEUROD4Q9HD90 331 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 UCKL1Q9NWZ5 548 aa6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 NUFIP1Q9UHK0 495 aaKnown RBP6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 NDRG4Q9ULP0 352 aaKnown RBP6.55□□□□□ -1.36
SYNPO2-206ENST00000610556 MICAL3Q7RTP6 2002 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OR2A25A4D2G3 310 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CLDN24A6NM45 220 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ARHGAP33O14559 1287 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 FKTNO75072 461 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 WISP3O95389 354 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PTTG1O95997 202 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 IGFBP1P08833 259 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 HTR1AP08908 422 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CSF2RAP15509 400 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 TLX1P31314 330 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PIK3CBP42338 1070 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CAV3P56539 151 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ANGPT1Q15389 498 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 FAM214AQ32MH5 1076 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CDKL4Q5MAI5 379 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 METTL2BQ6P1Q9 378 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 FGD2Q7Z6J4 655 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LYSMD2Q8IV50 215 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 IZUMO1Q8IYV9 350 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OR51G2Q8NGK0 314 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 DYNC2LI1Q8TCX1 351 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 RFKQ969G6 155 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CXorf40BQ96DE9 158 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 DMRT3Q9NQL9 472 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 MCUBQ9NWR8 336 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 HSPB11Q9Y547 144 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 BTN3A3O00478 584 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 RNASET2O00584 256 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ALPPP05187 535 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 RHOP08100 348 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ADH5P11766 374 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 NT5EP21589 574 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC19A1P41440 591 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 KHKP50053 298 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 SNRPD2P62316 118 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC3A1Q07837 685 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 FCHO2Q0JRZ9 810 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 E2F2Q14209 437 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LRRC32Q14392 662 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 SF3B4Q15427 424 aaKnown RBP eCLIP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 AGAP7PQ5VUJ5 663 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 THOC7Q6I9Y2 204 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ARMC6Q6NXE6 501 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC16A12Q6ZSM3 486 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 GET4Q7L5D6 327 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC46A3Q7Z3Q1 461 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PARGQ86W56 976 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OOSP2Q86WS3 158 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PTOV1Q86YD1 416 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OR2A12Q8NGT7 310 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 UBTD2Q8WUN7 234 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 OR5P2Q8WZ92 322 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 TANKQ92844 425 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ECHDC3Q96DC8 303 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF486Q96H40 463 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CLEC4MQ9H2X3 399 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 MRPS30Q9NP92 439 aaKnown RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 PHPT1Q9NRX4 125 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CLEC2DQ9UHP7 191 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 IRAK3Q9Y616 596 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 A0A1B0GVC2 190 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 A0A1W2PPK0 400 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 DAPL1A0PJW8 107 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 A6NIN4 97 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 LRRC72A6NJI9 287 aa6.54□□□□□ -1.36
SYNPO2-206ENST00000610556 CD8B2A6NJW9 211 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms