RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
USP6NL-206ENST00000609853 ZNF624Q9P2J8 865 aaPredicted RBP11.32□□□□□ -0.6
USP6NL-206ENST00000609853 SH3GLB1Q9Y371 365 aa11.32□□□□□ -0.6
USP6NL-206ENST00000609853 GOLGA4Q13439 2230 aaKnown RBP11.31□□□□□ -0.6
USP6NL-206ENST00000609853 FAM221BA6H8Z2 402 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 A6NCN8 305 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 URADA6NGE7 173 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 C10orf142B7Z368 130 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 PTGES3LE9PB15 166 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 CCNB2O95067 398 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 OXSR1O95747 527 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-206ENST00000609853 ASGR2P07307 311 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 FHP07954 510 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 CSNK2A2P19784 350 aaPredicted RBP11.31□□□□□ -0.6
USP6NL-206ENST00000609853 CCNA2P20248 432 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 CD247P20963 164 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 PCMT1P22061 227 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 ACSL1P33121 698 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 NUDT1P36639 197 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 ACTR1BP42025 376 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 RABIFP47224 123 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 KCNJ5P48544 419 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 NCBP2P52298 156 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP6NL-206ENST00000609853 ACTR1AP61163 376 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 PRR5P85299 388 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 TP53BP2Q13625 1128 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 CEBPEQ15744 281 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 EXOC3L2Q2M3D2 409 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 COLEC12Q5KU26 742 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 SLC48A1Q6P1K1 146 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 SMYD1Q8NB12 490 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 RPLP0P6Q8NHW5 317 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 BBS10Q8TAM1 723 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 ZNF354BQ96LW1 612 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 MAPKAP1Q9BPZ7 522 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 LHPPQ9H008 270 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 ZCCHC3Q9NUD5 404 aaKnown RBP11.31□□□□□ -0.6
USP6NL-206ENST00000609853 PLCXD1Q9NUJ7 323 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 CD207Q9UJ71 328 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 PCDHGA6Q9Y5G7 932 aa11.31□□□□□ -0.6
USP6NL-206ENST00000609853 A0A1W2PR48 441 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 OR2A25A4D2G3 310 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 PRAMEF25A6NGN4 478 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 OR5K4A6NMS3 321 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 ZNF99A8MXY4 864 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-206ENST00000609853 PROM1O43490 865 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 RGS10O43665 173 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 SLC28A2O43868 658 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 IGLV3-19P01714 112 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 SLC35G6P0C7Q6 338 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 MATN1P21941 496 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 CCR5P51681 352 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 CRISP3P54108 245 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 ILF3Q12906 894 aaKnown RBP eCLIP11.3□□□□□ -0.6
USP6NL-206ENST00000609853 NPTX1Q15818 432 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 DUSP7Q16829 419 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 TMEM92Q6UXU6 159 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 PRSS48Q7RTY5 328 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 ASPGQ86U10 573 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 P3H2Q8IVL5 708 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 SLC44A3Q8N4M1 653 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 AMER3Q8N944 861 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 OR8K5Q8NH50 307 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 RORBQ92753 470 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 TREX2Q9BQ50 279 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-206ENST00000609853 BTBD2Q9BX70 525 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-206ENST00000609853 C3orf14Q9HBI5 128 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 C5AR2Q9P296 337 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 PHF11Q9UIL8 331 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 CES1P1Q9UKY3 287 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 TMCC3Q9ULS5 477 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 ATG4BQ9Y4P1 393 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 KLK4Q9Y5K2 254 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 ENTPD2Q9Y5L3 495 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 GPC6Q9Y625 555 aaPredicted RBP11.3□□□□□ -0.6
USP6NL-206ENST00000609853 NINQ8N4C6 2090 aa11.3□□□□□ -0.6
USP6NL-206ENST00000609853 FANCMQ8IYD8 2048 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 LRP4O75096 1905 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 A0A0G2JN53 185 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TCRBV21S2A2A0A5A6 115 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 PRAMEF26H0Y7S4 382 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ASNA1O43681 348 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 MPZL2O60487 215 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 B4GALT2O60909 372 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 FAM20BO75063 409 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 NDUFS2O75306 463 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 RASGRP1O95267 797 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 SEMA4FO95754 770 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 AIFM1O95831 613 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TNFP01375 233 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 NR2F1P10589 423 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 GABRG2P18507 467 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 TNFRSF1BP20333 461 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 ZNF10P21506 573 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 CBLP22681 906 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 AK4P27144 223 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-206ENST00000609853 BMP8BP34820 402 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 SLC19A1P41440 591 aa11.29□□□□□ -0.6
USP6NL-206ENST00000609853 RPS26P62854 115 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms