RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CA13Q8N1Q1 262 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 OR5T3Q8NGG3 340 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 OR9A4Q8NGU2 314 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 SAMD4AQ9UPU9 718 aaKnown RBP20.34■□□□□ 0.85
USP6NL-204ENST00000606752 CYR61O00622 381 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 ARHGAP33O14559 1287 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 B4GALT2O60909 372 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 HOXB6P17509 224 aaKnown RBP20.34■□□□□ 0.85
USP6NL-204ENST00000606752 COL9A2Q14055 689 aaPredicted RBP20.34■□□□□ 0.85
USP6NL-204ENST00000606752 LRRC23Q53EV4 343 aaPredicted RBP20.34■□□□□ 0.85
USP6NL-204ENST00000606752 PYURFQ96I23 114 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 MAGIXQ9H6Y5 334 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 YY1AP1Q9H869 796 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 TMEM9Q9P0T7 183 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 PCDH15Q96QU1 1955 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 LY6G6EA0A0G2JKS1 128 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 A0A1W2PS29 197 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 HYKKA2RU49 373 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 SYPP08247 313 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 ARL4DP49703 201 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 XKP51811 444 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 DSTNP60981 165 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 SQSTM1Q13501 440 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 TAF11Q15544 211 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 ZNF630Q2M218 657 aaPredicted RBP20.33■□□□□ 0.85
USP6NL-204ENST00000606752 BHLHB9Q6PI77 547 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 CEACAM20Q6UY09 585 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 PRSS42Q7Z5A4 293 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 ANKFN1Q8N957 763 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 TTC29Q8NA56 475 aaPredicted RBP20.33■□□□□ 0.85
USP6NL-204ENST00000606752 SFXN5Q8TD22 340 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 SLC47A1Q96FL8 570 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 CENPNQ96H22 339 aaPredicted RBP20.33■□□□□ 0.85
USP6NL-204ENST00000606752 IRAK4Q9NWZ3 460 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 RPS6KA6Q9UK32 745 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 DTNAQ9Y4J8 743 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 U3KQA8 63 aa20.33■□□□□ 0.85
USP6NL-204ENST00000606752 CPED1A4D0V7 1026 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 FITM1A5D6W6 292 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 FOXS1O43638 330 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 RDH16O75452 317 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 SEPHS1P49903 392 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 RAB38P57729 211 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 EEF1A2Q05639 463 aaKnown RBP20.32■□□□□ 0.84
USP6NL-204ENST00000606752 TP53BP2Q13625 1128 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 SNAP47Q5SQN1 464 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 GUSBP11Q6P575 273 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 KMT5CQ86Y97 462 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 LRRC25Q8N386 305 aaPredicted RBP20.32■□□□□ 0.84
USP6NL-204ENST00000606752 TANKQ92844 425 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 EME1Q96AY2 570 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 MOAP1Q96BY2 351 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 ASPSCR1Q9BZE9 553 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 ZCCHC3Q9NUD5 404 aaKnown RBP20.32■□□□□ 0.84
USP6NL-204ENST00000606752 CLCA2Q9UQC9 943 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 ASXL3Q9C0F0 2248 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 A0A0A6YYC8 382 aaPredicted RBP20.32■□□□□ 0.84
USP6NL-204ENST00000606752 EME2A4GXA9 379 aaPredicted RBP20.32■□□□□ 0.84
USP6NL-204ENST00000606752 I3L1I5 382 aaPredicted RBP20.32■□□□□ 0.84
USP6NL-204ENST00000606752 MED26O95402 600 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 ARAFP10398 606 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 EMP3P54852 163 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 SHC2P98077 582 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 CDK6Q00534 326 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 SCARB2Q14108 478 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 ATP6AP1Q15904 470 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 NKG7Q16617 165 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 INAVAQ3KP66 663 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 SFT2D3Q587I9 215 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 INTS11Q5TA45 600 aaKnown RBP20.32■□□□□ 0.84
USP6NL-204ENST00000606752 CBLL1Q75N03 491 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 D2HGDHQ8N465 521 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 EID2Q8N6I1 236 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 HORMAD2Q8N7B1 307 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 OR2I1PQ8NGU4 316 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 SLC41A2Q96JW4 573 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 ENAMQ9NRM1 1142 aa20.32■□□□□ 0.84
USP6NL-204ENST00000606752 FAM149AA5PLN7 773 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 CHST10O43529 356 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 NSA2O95478 260 aaKnown RBP20.31■□□□□ 0.84
USP6NL-204ENST00000606752 LDLRP01130 860 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 MT-ND1P03886 318 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 MAGEA8P43361 318 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 RPS26P62854 115 aaKnown RBP20.31■□□□□ 0.84
USP6NL-204ENST00000606752 KCNAB1Q14722 419 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 GRM7Q14831 915 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 LPAL2Q16609 132 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 EIF3MQ7L2H7 374 aaKnown RBP20.31■□□□□ 0.84
USP6NL-204ENST00000606752 ZC3H7AQ8IWR0 971 aaKnown RBP20.31■□□□□ 0.84
USP6NL-204ENST00000606752 SLC30A8Q8IWU4 369 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 OR9A2Q8NGT5 310 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 NFKBIDQ8NI38 313 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 TBC1D20Q96BZ9 403 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 ELP4Q96EB1 424 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 NUDT22Q9BRQ3 303 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 SPRTNQ9H040 489 aaPredicted RBP20.31■□□□□ 0.84
USP6NL-204ENST00000606752 CLK4Q9HAZ1 481 aaKnown RBP20.31■□□□□ 0.84
USP6NL-204ENST00000606752 GMEB2Q9UKD1 530 aa20.31■□□□□ 0.84
USP6NL-204ENST00000606752 FAM227AF5H4B4 570 aa20.3■□□□□ 0.84
USP6NL-204ENST00000606752 PCDHGA12O60330 932 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms