RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PPIL3Q9H2H8 161 aaKnown RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 RHCEP18577 417 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 CDK2P24941 298 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 RAB4BP61018 213 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 POU6F2P78424 691 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 KANK2Q63ZY3 851 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ATG9BQ674R7 924 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 SCRN2Q96FV2 425 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 FZD3Q9NPG1 666 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 NUFIP1Q9UHK0 495 aaKnown RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF142P52746 1687 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 DOCK7Q96N67 2140 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 SCN1AP35498 2009 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 CLEC3AO75596 197 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 TNFP01375 233 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 KCNAB2Q13303 367 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ABHD5Q8WTS1 349 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 JPH3Q8WXH2 748 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 SSX3Q99909 188 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 G6PC3Q9BUM1 346 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 PLIN4Q96Q06 1357 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 M0R2N6 131 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 EBLN1P0CF75 366 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 HOXB9P17482 250 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 NKX2-5P52952 324 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 BORAQ6PGQ7 559 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 OR14K1Q8NGZ2 314 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 MCHR1Q99705 422 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 MAN2C1Q9NTJ4 1040 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 KNDC1Q76NI1 1749 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 PAK4O96013 591 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 MT-ND2P03891 347 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ALDH3B2P48448 385 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 NR0B1P51843 470 aaKnown RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 CAV3P56539 151 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 Q6ZVU0 165 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 MARVELD2Q8N4S9 558 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF283Q8N7M2 679 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 DNAAF1Q8NEP3 725 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 OR6N2Q8NGY6 317 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 C17orf62Q9BQA9 187 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 SARDHQ9UL12 918 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ADRB3P13945 408 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF30P17039 623 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 CBLP22681 906 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 ACVRL1P37023 503 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 MLLT1Q03111 559 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-217ENST00000602723 GALNT2Q10471 571 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 OR4K1Q8NGD4 311 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 DNTTIP1Q9H147 329 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 DMAC2Q9NW81 257 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 EBF1Q9UH73 591 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 SLC7A11Q9UPY5 501 aa9.23□□□□□ -0.93
CSMD1-217ENST00000602723 PYCR1P32322 319 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CAMLGP49069 296 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ID2Q02363 134 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PON2Q15165 354 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TPGS2Q68CL5 300 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 OR4E2Q8NGC2 313 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 SECISBP2Q96T21 854 aaKnown RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ABCG5Q9H222 651 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 HRGP04196 525 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PORP16435 677 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PPIGQ13427 754 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TSTD1Q8NFU3 115 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 REEP4Q9H6H4 257 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 FANCFQ9NPI8 374 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CLEC4EQ9ULY5 219 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 OR12D1P0DN82 309 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CTHP32929 405 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 NFE2L1Q14494 772 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 MYLK3Q32MK0 819 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 KCTD18Q6PI47 426 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 KREMEN2Q8NCW0 462 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 OR9A1PQ8NGU1 263 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 SLC45A3Q96JT2 553 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PTGES2Q9H7Z7 377 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 FAIMQ9NVQ4 179 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 C11orf98E9PRG8 122 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 IFNA10P01566 189 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ACTBP60709 375 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ACTG1P63261 375 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 DHCR24Q15392 516 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 BCL2L15Q5TBC7 163 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF516Q92618 1163 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 HOXB13Q92826 284 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CCM2LQ9NUG4 571 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 MED12Q93074 2177 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 HEATR5BQ9P2D3 2071 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 IGLV3-22A0A075B6J6 115 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 CAPN15O75808 1086 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PROZP22891 400 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 GRPRP30550 384 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PREPP48147 710 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 PTCHD3Q3KNS1 767 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 THAP4Q8WY91 577 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TFGQ92734 400 aaPredicted RBP9.22□□□□□ -0.93
CSMD1-217ENST00000602723 TMEM125Q96AQ2 219 aa9.22□□□□□ -0.93
CSMD1-217ENST00000602723 GIMAP5Q96F15 307 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms