RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SFTPCP11686 197 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 CLNS1AP54105 237 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 OLR1P78380 273 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 IGLV3-21P80748 117 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 MAT1AQ00266 395 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 KCNAB2Q13303 367 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 SQLEQ14534 574 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 PTGR1Q14914 329 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 CEBPEQ15744 281 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 GKAP1Q5VSY0 366 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 TMEM198Q66K66 360 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 OR52E8Q6IFG1 317 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 LCN10Q6JVE6 187 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 SLC48A1Q6P1K1 146 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 SCUBE1Q8IWY4 988 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 CACNA2D3Q8IZS8 1091 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 EFCAB3Q8N7B9 438 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 OR2Y1Q8NGV0 311 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 DNAJB14Q8TBM8 379 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 THOC1Q96FV9 657 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 PEX11GQ96HA9 241 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 RILPQ96NA2 401 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 TSSK3Q96PN8 268 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 EFHD1Q9BUP0 239 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 FAM107BQ9H098 131 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 ACTL8Q9H568 366 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 REEP4Q9H6H4 257 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 CTSFQ9UBX1 484 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 ATP6V1HQ9UI12 483 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 KCND3Q9UK17 655 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 FBXW2Q9UKT8 454 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 PSME2Q9UL46 239 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 EXO1Q9UQ84 846 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 PADI2Q9Y2J8 665 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 ARL2BPQ9Y2Y0 163 aa10.94□□□□□ -0.66
CHMP2A-207ENST00000600804 IGKV3D-11A0A0A0MRZ8 115 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 A0A1W2PQ72 361 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 SCAMP2O15127 329 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 CCDC22O60826 627 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 CNOT3O75175 753 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 PTPN4P29074 926 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 GALNSP34059 522 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 HPCAL1P37235 193 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 STX1BP61266 288 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 RHAGQ02094 409 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 SRSF11Q05519 484 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 C2orf80Q0P641 193 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 SYT16Q17RD7 645 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 CPZQ66K79 652 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 BORAQ6PGQ7 559 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 MIER2Q8N344 545 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 OR8J2Q8NGG1 315 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 TSPEARQ8WU66 669 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 CT55Q8WUE5 264 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 MIEF2Q96C03 454 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 COQ8BQ96D53 544 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 EGLN2Q96KS0 407 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 CSF3RQ99062 836 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 PRPF18Q99633 342 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 DPY30Q9C005 99 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 ADNPQ9H2P0 1102 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 SAR1AQ9NR31 198 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 SEMA3GQ9NS98 782 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 HEY2Q9UBP5 337 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 BAIAP2L1Q9UHR4 511 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 GPN3Q9UHW5 284 aaPredicted RBP10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 FARSAQ9Y285 508 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 CLDN16Q9Y5I7 305 aa10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 COPG1Q9Y678 874 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-207ENST00000600804 DYTNA2CJ06 578 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 NDUFAB1O14561 156 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 NKX2-8O15522 239 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 SLC22A3O75751 556 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 GPR75O95800 540 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 IGHEP01854 428 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 IFI6P09912 130 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 GP1BBP13224 206 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 TCN2P20062 427 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 GPX3P22352 226 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 FRKP42685 505 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 RPS15P62841 145 aaKnown RBP10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 DNASE1L3Q13609 305 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 SERTAD2Q14140 314 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 RPS6KA2Q15349 733 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 CRTC2Q53ET0 693 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 VWA2Q5GFL6 755 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 MLIPQ5VWP3 458 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 FAM91A1Q658Y4 838 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 C18orf63Q68DL7 685 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 HIST2H2BCQ6DN03 193 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 FAM199XQ6PEV8 388 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 TMEM205Q6UW68 189 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 MSANTD1Q6ZTZ1 278 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 FAM47BQ8NA70 645 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 TMEM52Q8NDY8 209 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 BCAS4Q8TDM0 211 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 ZNF681Q96N22 645 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 CATSPER2Q96P56 530 aa10.92□□□□□ -0.66
CHMP2A-207ENST00000600804 VN1R1Q9GZP7 353 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms