RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 TSPAN8P19075 237 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 NCF2P19878 526 aaPredicted RBP12.81□□□□□ -0.36
IRF3-225ENST00000600022 TBPL1P62380 186 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 OC90Q02509 493 aaPredicted RBP12.81□□□□□ -0.36
IRF3-225ENST00000600022 ABRAXAS2Q15018 415 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 TESK1Q15569 626 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 NSDHLQ15738 373 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 MEP1AQ16819 746 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 FBXO48Q5FWF7 155 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 MTFR2Q6P444 385 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 AGTRAPQ6RW13 159 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 RPS27LQ71UM5 84 aaKnown RBP12.81□□□□□ -0.36
IRF3-225ENST00000600022 GOLGA7Q7Z5G4 137 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 CLNKQ7Z7G1 428 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 CPSF7Q8N684 471 aaKnown RBP12.81□□□□□ -0.36
IRF3-225ENST00000600022 SNX31Q8N9S9 440 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 CEP70Q8NHQ1 597 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 M1APQ8TC57 530 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 AGAP11Q8TF27 550 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 ESAMQ96AP7 390 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 ZBTB26Q9HCK0 441 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 MMP25Q9NPA2 562 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 PCDHGB6Q9Y5F9 930 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 CACNA1CQ13936 2221 aa12.81□□□□□ -0.36
IRF3-225ENST00000600022 GTF3C1Q12789 2109 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 ITPR3Q14573 2671 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 UBFD1O14562 309 aaKnown RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 SKAP2O75563 359 aaPredicted RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 CDH1P12830 882 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 NPPBP16860 134 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 HMOX2P30519 316 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 PTGER1P34995 402 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 RFC3P40938 356 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 MNAT1P51948 309 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 CASP6P55212 293 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 RIPPLY3P57055 190 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 RPS15AP62244 130 aaKnown RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 BTG2P78543 158 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 ACTN3Q08043 901 aaPredicted RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 TRAF3Q13114 568 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 NAE1Q13564 534 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 KRT72Q14CN4 511 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 MAPKAPK3Q16644 382 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 KRTCAP3Q53RY4 240 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 SLC25A25Q6KCM7 469 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 CAPN13Q6MZZ7 669 aaPredicted RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 MILR1Q7Z6M3 343 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 ASPGQ86U10 573 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 DDIASQ8IXT1 998 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 ZNF740Q8NDX6 193 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 PLPP5Q8NEB5 264 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 SLC13A3Q8WWT9 602 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 MAGED4Q96JG8 741 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 EBF4Q9BQW3 602 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 SGPP1Q9BX95 441 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 SPNS1Q9H2V7 528 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 NOL11Q9H8H0 719 aaKnown RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 IPPKQ9H8X2 491 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 MEAF6Q9HAF1 191 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 ANKHQ9HCJ1 492 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 CCDC177Q9NQR7 707 aaPredicted RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 DNAJC11Q9NVH1 559 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 LRFN1Q9P244 771 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 C19orf25Q9UFG5 118 aaPredicted RBP12.8□□□□□ -0.36
IRF3-225ENST00000600022 SPG11Q96JI7 2443 aa12.8□□□□□ -0.36
IRF3-225ENST00000600022 MED13LQ71F56 2210 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 ZNF195O14628 629 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 CHST10O43529 356 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 B4GALT2O60909 372 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 WDR47O94967 919 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 CD46P15529 392 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 EPORP19235 508 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 AGAP20933 346 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 TPP2P29144 1249 aaPredicted RBP12.79□□□□□ -0.36
IRF3-225ENST00000600022 GDF5P43026 501 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 SMSP52788 366 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 OR4D2P58180 307 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 SLC26A5P58743 744 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 AP2B1P63010 937 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 IRX1P78414 480 aaPredicted RBP12.79□□□□□ -0.36
IRF3-225ENST00000600022 PCDH1Q08174 1060 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 SLC9B1Q4ZJI4 515 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 KANK2Q63ZY3 851 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 FAM91A1Q658Y4 838 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 RPS19BP1Q86WX3 136 aaKnown RBP12.79□□□□□ -0.36
IRF3-225ENST00000600022 MARVELD2Q8N4S9 558 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 METTL6Q8TCB7 284 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 ACTRT2Q8TDY3 377 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 ELP5Q8TE02 316 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 TWIST2Q8WVJ9 160 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 PPP1R36Q96LQ0 422 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 DMRTA2Q96SC8 542 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 NMUR2Q9GZQ4 415 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 TNFRSF12AQ9NP84 129 aa12.79□□□□□ -0.36
IRF3-225ENST00000600022 A8MUA0 341 aa12.78□□□□□ -0.36
IRF3-225ENST00000600022 MAGEB17A8MXT2 336 aa12.78□□□□□ -0.36
IRF3-225ENST00000600022 TMEM233B4DJY2 109 aa12.78□□□□□ -0.36
IRF3-225ENST00000600022 E9PBE3 544 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms