RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 AZIN1O14977 448 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 ITM2AO43736 263 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 NPHS1O60500 1241 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 WISP2O76076 250 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 WISP1O95388 367 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 IGKV3-11P04433 115 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 FGF4P08620 206 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 UROSP10746 265 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 ALOX15P16050 662 aaPredicted RBP10.37□□□□□ -0.75
VRK3-210ENST00000596121 TLX1P31314 330 aaPredicted RBP10.37□□□□□ -0.75
VRK3-210ENST00000596121 PTGER1P34995 402 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 BUD31P41223 144 aaPredicted RBP10.37□□□□□ -0.75
VRK3-210ENST00000596121 SERPINB4P48594 390 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 CLCN2P51788 898 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 AP2B1P63010 937 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 MGAT2Q10469 447 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 KIAA0040Q15053 153 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 KANK2Q63ZY3 851 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 SPINK14Q6IE38 97 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 FAM180BQ6P0A1 224 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 GALNT18Q6P9A2 607 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 Q6ZSR9 355 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 TMEM132CQ8N3T6 1108 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 SLC5A8Q8N695 610 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 MORN4Q8NDC4 146 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 OR14A16Q8NHC5 309 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 C16orf78Q8WTQ4 265 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 VMP1Q96GC9 406 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 SENP5Q96HI0 755 aaPredicted RBP10.37□□□□□ -0.75
VRK3-210ENST00000596121 EBPLQ9BY08 206 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 DEFB126Q9BYW3 111 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 SIRT5Q9NXA8 310 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 SENP1Q9P0U3 644 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 MCM8Q9UJA3 840 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 EXO1Q9UQ84 846 aaKnown RBP10.37□□□□□ -0.75
VRK3-210ENST00000596121 FIS1Q9Y3D6 152 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 DNAJC15Q9Y5T4 150 aa10.37□□□□□ -0.75
VRK3-210ENST00000596121 DYTNA2CJ06 578 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 PCDH7O60245 1069 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 ERLIN1O75477 346 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 LYPLA1O75608 230 aaPredicted RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 NEURL1O76050 574 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 ZIC2O95409 532 aaPredicted RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 UQCRHP07919 91 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 IL3P08700 152 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 CT62P0C5K7 136 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 SLC35E2P0CK97 266 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 S1PR1P21453 382 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 TIA1P31483 386 aaKnown RBP eCLIP10.36□□□□□ -0.75
VRK3-210ENST00000596121 TRHRP34981 398 aaPredicted RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 UQCRFS1P47985 274 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 XKP51811 444 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 TAS2R50P59544 299 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 RNF4P78317 190 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 ZNF267Q14586 743 aaPredicted RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 CASP8Q14790 479 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 OR52E8Q6IFG1 317 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 SLC48A1Q6P1K1 146 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 NUDCD3Q8IVD9 361 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 ST13P4Q8IZP2 240 aaPredicted RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 LGI4Q8N135 537 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 SIMC1Q8NDZ2 872 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.36□□□□□ -0.75
VRK3-210ENST00000596121 DAZLQ92904 295 aaKnown RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 TLCD1Q96CP7 247 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 RBM18Q96H35 190 aaKnown RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 ZNF681Q96N22 645 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 DGAT2Q96PD7 388 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 UTP23Q9BRU9 249 aaKnown RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 TRMOQ9BU70 441 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 C20orf27Q9GZN8 174 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.36□□□□□ -0.75
VRK3-210ENST00000596121 TRIM45Q9H8W5 580 aaPredicted RBP10.36□□□□□ -0.75
VRK3-210ENST00000596121 TMBIM4Q9HC24 238 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 NMRK1Q9NWW6 199 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 GIMAP2Q9UG22 337 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 TEKT2Q9UIF3 430 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 ZDHHC2Q9UIJ5 367 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 DLGAP4Q9Y2H0 992 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 TRAF6Q9Y4K3 522 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 ACTL7BQ9Y614 415 aa10.36□□□□□ -0.75
VRK3-210ENST00000596121 TRAV17A0A0B4J275 112 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 TCP11X1B4DZS4 312 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 NPIPB8E9PQR5 432 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 H3BQF6 201 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 WWP2O00308 870 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 CRCPO75575 148 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 ITGA10O75578 1167 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 OR2J2O76002 312 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 ZFAND5O76080 213 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 LINC00032P0C843 101 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 CPMP14384 443 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 PRPH2P23942 346 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 TACR1P25103 407 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 FEN1P39748 380 aaKnown RBP10.35□□□□□ -0.75
VRK3-210ENST00000596121 HK2P52789 917 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 WDR4P57081 412 aaKnown RBP10.35□□□□□ -0.75
VRK3-210ENST00000596121 TRA2BP62995 288 aaKnown RBP10.35□□□□□ -0.75
VRK3-210ENST00000596121 ERVK-8P63133 956 aa10.35□□□□□ -0.75
VRK3-210ENST00000596121 SRSF1Q07955 248 aaKnown RBP eCLIP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms