RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 GABRR3A8MPY1 467 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 PRKNO60260 465 aaPredicted RBP20.4■□□□□ 0.86
HOMER3-206ENST00000594439 COX7A2P14406 83 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 TIA1P31483 386 aaKnown RBP eCLIP20.4■□□□□ 0.86
HOMER3-206ENST00000594439 ST13P50502 369 aaKnown RBP20.4■□□□□ 0.86
HOMER3-206ENST00000594439 FOXK1P85037 733 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 IMPG1Q17R60 797 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 SPDYAQ5MJ70 313 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 CES4AQ5XG92 561 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 SLC48A1Q6P1K1 146 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 RNF165Q6ZSG1 346 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 OR4K14Q8NGD5 310 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 CPT1CQ8TCG5 803 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 ZNF721Q8TF20 911 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 MIB2Q96AX9 1013 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 RBM18Q96H35 190 aaKnown RBP20.4■□□□□ 0.86
HOMER3-206ENST00000594439 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.4■□□□□ 0.86
HOMER3-206ENST00000594439 STMN4Q9H169 189 aaPredicted RBP20.4■□□□□ 0.86
HOMER3-206ENST00000594439 TUBB1Q9H4B7 451 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 EML4Q9HC35 981 aaKnown RBP20.4■□□□□ 0.86
HOMER3-206ENST00000594439 KCNK9Q9NPC2 374 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 ABI3Q9P2A4 366 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 FIS1Q9Y3D6 152 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 TRAF6Q9Y4K3 522 aa20.4■□□□□ 0.86
HOMER3-206ENST00000594439 TRAV17A0A0B4J275 112 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 TMEM233B4DJY2 109 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 BIRC5O15392 142 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 RSL1D1O76021 490 aaKnown RBP20.39■□□□□ 0.85
HOMER3-206ENST00000594439 ZFAND5O76080 213 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 ZWINTO95229 277 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 SLC35E2P0CK97 266 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 PIK3R1P27986 724 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 GALNSP34059 522 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 TUBA3CQ13748 450 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 IGFBP7Q16270 282 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 UGT3A2Q3SY77 523 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 TUBA3EQ6PEY2 450 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 TLCD1Q96CP7 247 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 SENP5Q96HI0 755 aaPredicted RBP20.39■□□□□ 0.85
HOMER3-206ENST00000594439 FAIM2Q9BWQ8 316 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 EBPLQ9BY08 206 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 HEY2Q9UBP5 337 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 DNAJC15Q9Y5T4 150 aa20.39■□□□□ 0.85
HOMER3-206ENST00000594439 NBASA2RRP1 2371 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 WDR91A4D1P6 747 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 TMEM200CA6NKL6 621 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 NPIPB8E9PQR5 432 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 HRKO00198 91 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 SLC28A1O00337 649 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 IGKV3-11P04433 115 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 PRPH2P23942 346 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 CD96P40200 585 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 SPRED3Q2MJR0 410 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 ZNF468Q5VIY5 522 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-206ENST00000594439 RPUSD3Q6P087 351 aaKnown RBP20.38■□□□□ 0.85
HOMER3-206ENST00000594439 HSDL2Q6YN16 418 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 CLYBLQ8N0X4 340 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 CISD2Q8N5K1 135 aaKnown RBP20.38■□□□□ 0.85
HOMER3-206ENST00000594439 MDS2Q8NDY4 140 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 DOK4Q8TEW6 326 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 C16orf78Q8WTQ4 265 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 THAP3Q8WTV1 239 aaPredicted RBP20.38■□□□□ 0.85
HOMER3-206ENST00000594439 SNRNP40Q96DI7 357 aaKnown RBP20.38■□□□□ 0.85
HOMER3-206ENST00000594439 C19orf60Q96EN9 201 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 UTP23Q9BRU9 249 aaKnown RBP20.38■□□□□ 0.85
HOMER3-206ENST00000594439 DLGAP4Q9Y2H0 992 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 NTNG1Q9Y2I2 539 aa20.38■□□□□ 0.85
HOMER3-206ENST00000594439 HELZ2Q9BYK8 2649 aaKnown RBP20.38■□□□□ 0.85
HOMER3-206ENST00000594439 CROCCQ5TZA2 2017 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 GNG14A0A1W2PPG7 69 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 CDK2AP1O14519 115 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 OR10H2O60403 315 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 PRAMEF2O60811 474 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 IL3P08700 152 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 ANXA4P09525 319 aaPredicted RBP20.37■□□□□ 0.85
HOMER3-206ENST00000594439 CPMP14384 443 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 XKP51811 444 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 ZNF750Q32MQ0 723 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 SH2D4BQ5SQS7 431 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 Q6ZSR9 355 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 HOMEZQ8IX15 550 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 OR2T11Q8NH01 316 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 OR8K3Q8NH51 312 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 FAM76AQ8TAV0 307 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 FBXL20Q96IG2 436 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 SIGLEC12Q96PQ1 595 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 ANKRD10Q9NXR5 420 aa20.37■□□□□ 0.85
HOMER3-206ENST00000594439 GOLGA6L10A6NI86 522 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 RGS14O43566 566 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 DYRK3O43781 588 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 CHEK2O96017 543 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 SERPINE1P05121 402 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 DRD2P14416 443 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 TRHRP34981 398 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-206ENST00000594439 ALDH9A1P49189 494 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 RNF4P78317 190 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 ZNF267Q14586 743 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-206ENST00000594439 KIAA0040Q15053 153 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 OR1C1Q15619 314 aa20.36■□□□□ 0.85
HOMER3-206ENST00000594439 CHI3L2Q15782 390 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms