RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 LTA4HP09960 611 aaKnown RBP22.06■■□□□ 1.12
LSM4-202ENST00000593564 CRABP2P29373 138 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 PIK3CBP42338 1070 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 RAP1GDS1P52306 607 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 TNFRSF17Q02223 184 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 FOLH1Q04609 750 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 SLMAPQ14BN4 828 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 KBTBD12Q3ZCT8 623 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 WLSQ5T9L3 541 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 CES4AQ5XG92 561 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 DGAT2L6Q6ZPD8 337 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 TBC1D1Q86TI0 1168 aaPredicted RBP22.06■■□□□ 1.12
LSM4-202ENST00000593564 GPR180Q86V85 440 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 ZCCHC7Q8N3Z6 543 aaKnown RBP22.06■■□□□ 1.12
LSM4-202ENST00000593564 PPM1NQ8N819 430 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 HUS1BQ8NHY5 278 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 PPWD1Q96BP3 646 aaKnown RBP22.06■■□□□ 1.12
LSM4-202ENST00000593564 SPACA9Q96E40 222 aaPredicted RBP22.06■■□□□ 1.12
LSM4-202ENST00000593564 CENPKQ9BS16 269 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 LDAHQ9H6V9 325 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 DMRT3Q9NQL9 472 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.06■■□□□ 1.12
LSM4-202ENST00000593564 TSC22D4Q9Y3Q8 395 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 EML6Q6ZMW3 1958 aa22.06■■□□□ 1.12
LSM4-202ENST00000593564 TRGV5A0A0B4J1U4 118 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 A0A0G2JNJ9 132 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 HRKO00198 91 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 PLPP1O14494 284 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 FAM155BO75949 473 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 ALOX15P16050 662 aaPredicted RBP22.05■■□□□ 1.12
LSM4-202ENST00000593564 EPB42P16452 691 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 TLX1P31314 330 aaPredicted RBP22.05■■□□□ 1.12
LSM4-202ENST00000593564 ARFIP1P53367 373 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 DDX39BQ13838 428 aaKnown RBP22.05■■□□□ 1.12
LSM4-202ENST00000593564 C1orf185Q5T7R7 199 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 C18orf63Q68DL7 685 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 TMEM200AQ86VY9 491 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 DND1Q8IYX4 353 aaKnown RBP22.05■■□□□ 1.12
LSM4-202ENST00000593564 ST13P4Q8IZP2 240 aaPredicted RBP22.05■■□□□ 1.12
LSM4-202ENST00000593564 RNF175Q8N4F7 328 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 MYRIPQ8NFW9 859 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 ZNF703Q9H7S9 590 aaPredicted RBP22.05■■□□□ 1.12
LSM4-202ENST00000593564 Q9UFV3 132 aa22.05■■□□□ 1.12
LSM4-202ENST00000593564 FAM47E-STBD1D6RA91 191 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 RAD51CO43502 376 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 MTHFD2P13995 350 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 CD1EP15812 388 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 ENDOUP21128 410 aaKnown RBP22.04■■□□□ 1.12
LSM4-202ENST00000593564 ADH7P40394 386 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 HNRNPH2P55795 449 aaKnown RBP22.04■■□□□ 1.12
LSM4-202ENST00000593564 KCNJ2P63252 427 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 MYBPHQ13203 477 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 SPRED3Q2MJR0 410 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 FBXW8Q8N3Y1 598 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 PELOQ9BRX2 385 aaKnown RBP22.04■■□□□ 1.12
LSM4-202ENST00000593564 EXO5Q9H790 373 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 ZFP64Q9NPA5 681 aa22.04■■□□□ 1.12
LSM4-202ENST00000593564 BOKQ9UMX3 212 aaPredicted RBP22.04■■□□□ 1.12
LSM4-202ENST00000593564 SYCE1LA8MT33 242 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 PRKRAO75569 313 aaKnown RBP22.03■■□□□ 1.12
LSM4-202ENST00000593564 FBXO45P0C2W1 286 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 GABRA1P14867 456 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 STX2P32856 288 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 BUD31P41223 144 aaPredicted RBP22.03■■□□□ 1.12
LSM4-202ENST00000593564 NAB1Q13506 487 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 SLC25A35Q3KQZ1 300 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 LIPJQ5W064 366 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 LRRC25Q8N386 305 aaPredicted RBP22.03■■□□□ 1.12
LSM4-202ENST00000593564 TEX9Q8N6V9 391 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 SPATA4Q8NEY3 305 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 MTERF1Q99551 399 aaKnown RBP22.03■■□□□ 1.12
LSM4-202ENST00000593564 CNPPD1Q9BV87 410 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 ZNF717Q9BY31 904 aaPredicted RBP22.03■■□□□ 1.12
LSM4-202ENST00000593564 PROK2Q9HC23 129 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 CNIH4Q9P003 139 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 SPRR3Q9UBC9 169 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 PCDHGB3Q9Y5G1 929 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 PCDHGA11Q9Y5H2 935 aa22.03■■□□□ 1.12
LSM4-202ENST00000593564 CHCHD2Q9Y6H1 151 aaPredicted RBP22.03■■□□□ 1.12
LSM4-202ENST00000593564 IQANK1A0A1B0GTG1 560 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 CCDC189A1A4V9 331 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 LRRC3CA6NJW4 275 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 PROM1O43490 865 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 RFPL3SP0C7P2 107 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 HERVK_113P63132 956 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 ERVK-8P63133 956 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 RIPPLY2Q5TAB7 128 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 PRAMEF20Q5VT98 475 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 MRM1Q6IN84 353 aaKnown RBP22.02■■□□□ 1.12
LSM4-202ENST00000593564 SLC29A4Q7RTT9 530 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 CCDC91Q7Z6B0 441 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 MYLK4Q86YV6 388 aaPredicted RBP22.02■■□□□ 1.12
LSM4-202ENST00000593564 LIX1LQ8IVB5 337 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 OR10G3Q8NGC4 313 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 RHEBL1Q8TAI7 183 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 NXNL1Q96CM4 212 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 ERVK-6Q9BXR3 956 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 ACKR4Q9NPB9 350 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 QPCTLQ9NXS2 382 aa22.02■■□□□ 1.12
LSM4-202ENST00000593564 ERVK-19Q9WJR5 959 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms