RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 OR52P1PQ8NH57 321 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 WDR48Q8TAF3 677 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 C16orf78Q8WTQ4 265 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 C1GALT1C1Q96EU7 318 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 SOSTQ9BQB4 213 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 TRAF4Q9BUZ4 470 aaPredicted RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 PPP1R3EQ9H7J1 279 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 COMMD3Q9UBI1 195 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 PPIL1Q9Y3C6 166 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 BRCA2P51587 3418 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 A0A1W2PRB8 838 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 SAP18O00422 153 aaKnown RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 STK25O00506 426 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 FAAHO00519 579 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 BNIP3LO60238 219 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 SLC16A8O95907 504 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 CAV3P56539 151 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 PPP3R1P63098 170 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 ELAVL2Q12926 359 aaKnown RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 LRRC73Q5JTD7 316 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 TCTN3Q6NUS6 607 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 PGBD2Q6P3X8 592 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 CNIH2Q6PI25 160 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 TMC8Q8IU68 726 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 KLHDC8AQ8IYD2 350 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 FAM26EQ8N5C1 309 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 OR56A3Q8NH54 315 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 NEIL2Q969S2 332 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 ECHDC3Q96DC8 303 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 SYT17Q9BSW7 474 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 TRIM45Q9H8W5 580 aaPredicted RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 NLKQ9UBE8 527 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 TESQ9UGI8 421 aaKnown RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 FAM240BA0A1B0GVZ2 78 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 A0A1W2PQ72 361 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 LRRTM2O43300 516 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 LATS1O95835 1130 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 TP53P04637 393 aaPredicted RBP17.08■□□□□ 0.33
SPC24-206ENST00000592540 PRKAR1AP10644 381 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 TNNI3P19429 210 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 IMPA1P29218 277 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 RPL3P39023 403 aaKnown RBP17.08■□□□□ 0.33
SPC24-206ENST00000592540 BDKRB1P46663 353 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 CLDN20P56880 219 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 CRTC2Q53ET0 693 aaPredicted RBP17.08■□□□□ 0.33
SPC24-206ENST00000592540 IER5LQ5T953 404 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 ZDHHC20Q5W0Z9 365 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 FAM71E1Q6IPT2 247 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 SLCO4C1Q6ZQN7 724 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 TMPRSS11BQ86T26 416 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 GPR32P1Q8NGA4 272 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 SLC22A12Q96S37 553 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 RSPO3Q9BXY4 272 aaPredicted RBP17.08■□□□□ 0.33
SPC24-206ENST00000592540 SUV39H2Q9H5I1 410 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 DIABLOQ9NR28 239 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 CLEC4EQ9ULY5 219 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 SF3B6Q9Y3B4 125 aaKnown RBP17.08■□□□□ 0.33
SPC24-206ENST00000592540 PCDHGB7Q9Y5F8 929 aa17.08■□□□□ 0.33
SPC24-206ENST00000592540 PLXND1Q9Y4D7 1925 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 OR2AG2A6NM03 316 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 SMLR1H3BR10 107 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 LYRM1O43325 122 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 GREM1O60565 184 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 KLHL18O94889 574 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 H1F0P07305 194 aaKnown RBP17.08■□□□□ 0.32
SPC24-206ENST00000592540 CYP2A6P11509 494 aaPredicted RBP17.08■□□□□ 0.32
SPC24-206ENST00000592540 NUDT1P36639 197 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 WNT4P56705 351 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 TAS2R50P59544 299 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 CYP4F8P98187 520 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 P2RY14Q15391 338 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 TAF12Q16514 161 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 SYT14P1Q58G82 188 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 SIX5Q8N196 739 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 ADAMTS19Q8TE59 1207 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 UPRTQ96BW1 309 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 PDXPQ96GD0 296 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 CASD1Q96PB1 797 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 DHRS9Q9BPW9 319 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 ZNF717Q9BY31 904 aaPredicted RBP17.08■□□□□ 0.32
SPC24-206ENST00000592540 B3GAT2Q9NPZ5 323 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 MCUBQ9NWR8 336 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 MALT1Q9UDY8 824 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 HSPB11Q9Y547 144 aa17.08■□□□□ 0.32
SPC24-206ENST00000592540 PITPNM1O00562 1244 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 SLC30A4O14863 429 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 NOS1APO75052 506 aaPredicted RBP17.07■□□□□ 0.32
SPC24-206ENST00000592540 ZNF30P17039 623 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 RRAS2P62070 204 aaPredicted RBP17.07■□□□□ 0.32
SPC24-206ENST00000592540 LMAN2Q12907 356 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 OR2G6Q5TZ20 316 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 SLC8B1Q6J4K2 584 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 C17orf99Q6UX52 265 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 QSOX2Q6ZRP7 698 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 SLC38A6Q8IZM9 456 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 TMEM145Q8NBT3 493 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 SLC38A5Q8WUX1 472 aa17.07■□□□□ 0.32
SPC24-206ENST00000592540 BCL7CQ8WUZ0 217 aaPredicted RBP17.07■□□□□ 0.32
SPC24-206ENST00000592540 TM9SF4Q92544 642 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms