RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 ROGDIQ9GZN7 287 aa16.79■□□□□ 0.28
CIRBP-238ENST00000592412 RHOJQ9H4E5 214 aa16.79■□□□□ 0.28
CIRBP-238ENST00000592412 CAB39LQ9H9S4 337 aa16.79■□□□□ 0.28
CIRBP-238ENST00000592412 QPCTLQ9NXS2 382 aa16.79■□□□□ 0.28
CIRBP-238ENST00000592412 BOKQ9UMX3 212 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-238ENST00000592412 FREM3P0C091 2139 aa16.79■□□□□ 0.28
CIRBP-238ENST00000592412 MPDZO75970 2070 aa16.79■□□□□ 0.28
CIRBP-238ENST00000592412 NINQ8N4C6 2090 aa16.79■□□□□ 0.28
CIRBP-238ENST00000592412 JMJD1CQ15652 2540 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 DVL2O14641 736 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 TRIM3O75382 744 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-238ENST00000592412 PRKRAO75569 313 aaKnown RBP16.78■□□□□ 0.28
CIRBP-238ENST00000592412 STK16O75716 305 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 EPPINO95925 133 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 CLPSP04118 112 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 CPN2P22792 545 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 MSH2P43246 934 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 TGM3Q08188 693 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 DUSP8Q13202 625 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 CHIT1Q13231 466 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 PDK4Q16654 411 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 TCAIMQ8N3R3 496 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 RNF175Q8N4F7 328 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 SLC15A4Q8N697 577 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 FBXL20Q96IG2 436 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 DGAT2Q96PD7 388 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 PLEKHF2Q9H8W4 249 aa16.78■□□□□ 0.28
CIRBP-238ENST00000592412 PTBP2Q9UKA9 531 aaKnown RBP16.78■□□□□ 0.28
CIRBP-238ENST00000592412 MTO1Q9Y2Z2 717 aaKnown RBP16.78■□□□□ 0.28
CIRBP-238ENST00000592412 WASHC1A8K0Z3 465 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 SAP18O00422 153 aaKnown RBP16.77■□□□□ 0.28
CIRBP-238ENST00000592412 TGFB1P01137 390 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 RAF1P04049 648 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 COX7A2P14406 83 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 CD1DP15813 335 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 TIMP3P35625 211 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 GMPRP36959 345 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 CASP2P42575 452 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 EBPQ15125 230 aaKnown RBP16.77■□□□□ 0.28
CIRBP-238ENST00000592412 TBCCQ15814 346 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 DEFB113Q30KQ7 82 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 CDKL4Q5MAI5 379 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 C18orf63Q68DL7 685 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 SULT1C3Q6IMI6 304 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 CAMKMTQ7Z624 323 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 GPSM1Q86YR5 675 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 LAS2Q8IYD9 372 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 SLC35F6Q8N357 371 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 PDPRQ8NCN5 879 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 FAM13CQ8NE31 585 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 FBXO36Q8NEA4 188 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 SRFBP1Q8NEF9 429 aaKnown RBP16.77■□□□□ 0.28
CIRBP-238ENST00000592412 TIMP4Q99727 224 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 WWTR1Q9GZV5 400 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 CNOT10Q9H9A5 744 aaKnown RBP16.77■□□□□ 0.28
CIRBP-238ENST00000592412 CNIH4Q9P003 139 aa16.77■□□□□ 0.28
CIRBP-238ENST00000592412 ZNF629Q9UEG4 869 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-238ENST00000592412 AHRRA9YTQ3 701 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 PHGDHO43175 533 aaKnown RBP16.76■□□□□ 0.27
CIRBP-238ENST00000592412 C1QAP02745 245 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 CCDC166P0CW27 439 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 HOXC12P31275 282 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 SSR2P43308 183 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 HNRNPH2P55795 449 aaKnown RBP16.76■□□□□ 0.27
CIRBP-238ENST00000592412 SLC37A1P57057 533 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 HERVK_113P63132 956 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 ERVK-8P63133 956 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 IRF8Q02556 426 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 LTBQ06643 244 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 TBL3Q12788 808 aaKnown RBP16.76■□□□□ 0.27
CIRBP-238ENST00000592412 NTRK2Q16620 822 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 TMEM35AQ53FP2 167 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 FNDC7Q5VTL7 733 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 BICRALQ6AI39 1079 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 Q71RC1 249 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-238ENST00000592412 LACC1Q8IV20 430 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 ZNF441Q8N8Z8 693 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 JSRP1Q96MG2 331 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-238ENST00000592412 GAL3ST4Q96RP7 486 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 DOHHQ9BU89 302 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 ERVK-6Q9BXR3 956 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 PRDM14Q9GZV8 571 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 OR51B5Q9H339 312 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 UBQLN3Q9H347 655 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 RPF2Q9H7B2 306 aaKnown RBP16.76■□□□□ 0.27
CIRBP-238ENST00000592412 SNX12Q9UMY4 172 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 ERVK-19Q9WJR5 959 aa16.76■□□□□ 0.27
CIRBP-238ENST00000592412 C15orf38-AP3S2A0A0A6YYH1 394 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 A0A1W2PPR1 153 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 E7ESA3 106 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 CES2O00748 559 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 CCNT2O60583 730 aaKnown RBP16.75■□□□□ 0.27
CIRBP-238ENST00000592412 EPXP11678 715 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 GDF1P27539 372 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 PLIN5Q00G26 463 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 POU4F1Q01851 419 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 SLAMF1Q13291 335 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 LAPTM5Q13571 262 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 SPRED3Q2MJR0 410 aa16.75■□□□□ 0.27
CIRBP-238ENST00000592412 AP5B1Q2VPB7 878 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms