RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 FOXE1O00358 373 aaPredicted RBP17.42■□□□□ 0.38
CCDC43-205ENST00000592333 PLPP1O14494 284 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 FAM155BO75949 473 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 KLHL2O95198 593 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 GPR75O95800 540 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 GABRA1P14867 456 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 SERPINB3P29508 390 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 FOLH1Q04609 750 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 PMPCAQ10713 525 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 MRM1Q6IN84 353 aaKnown RBP17.42■□□□□ 0.38
CCDC43-205ENST00000592333 C9orf40Q8IXQ3 194 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 CENPLQ8N0S6 344 aaPredicted RBP17.42■□□□□ 0.38
CCDC43-205ENST00000592333 TEX9Q8N6V9 391 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 L3MBTL4Q8NA19 623 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 MYRIPQ8NFW9 859 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 OR5M3Q8NGP4 307 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 SPACA9Q96E40 222 aaPredicted RBP17.42■□□□□ 0.38
CCDC43-205ENST00000592333 WDR41Q9HAD4 459 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 PRM3Q9NNZ6 103 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 KCNN3Q9UGI6 736 aa17.42■□□□□ 0.38
CCDC43-205ENST00000592333 ZNF407Q9C0G0 2248 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 TEP1Q99973 2627 aaKnown RBP17.41■□□□□ 0.38
CCDC43-205ENST00000592333 IQANK1A0A1B0GTG1 560 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 ZNF354AO60765 605 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-205ENST00000592333 C2P06681 752 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 CCL3P10147 92 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 CASQ1P31415 396 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 MAGEA5P43359 124 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 ETF1P62495 437 aaKnown RBP17.41■□□□□ 0.38
CCDC43-205ENST00000592333 C2orf54Q08AI8 447 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 ASPHQ12797 758 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 TBCELQ5QJ74 424 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 WLSQ5T9L3 541 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 ZDHHC24Q6UX98 284 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 B3GNT6Q6ZMB0 384 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 SPNS3Q6ZMD2 512 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 SLC29A4Q7RTT9 530 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 CCDC25Q86WR0 208 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 DMRTC2Q8IXT2 367 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-205ENST00000592333 CLYBLQ8N0X4 340 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 FBXW8Q8N3Y1 598 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 TTYH2Q9BSA4 534 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 ACKR4Q9NPB9 350 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 PNPLA3Q9NST1 481 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 TMCO1Q9UM00 188 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 BOKQ9UMX3 212 aaPredicted RBP17.41■□□□□ 0.38
CCDC43-205ENST00000592333 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.41■□□□□ 0.38
CCDC43-205ENST00000592333 CCDC168Q8NDH2 2452 aa17.41■□□□□ 0.38
CCDC43-205ENST00000592333 A0A0A6YYD5 115 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 A0A0G2JMM0 328 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 MYOCOSA0A1B0GUC4 107 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 A0A1W2PPB8 328 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 A0A1W2PRS3 328 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 ANKRD33BA6NCL7 494 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 KIR3DP1A8MWS1 328 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 SEMA3DO95025 777 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 FBXO45P0C2W1 286 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 SLC35E2P0CK97 266 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 GFAPP14136 432 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 PHBP35232 272 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 BSGP35613 385 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 PEX19P40855 299 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 ZFP36L2P47974 494 aaKnown RBP17.4■□□□□ 0.38
CCDC43-205ENST00000592333 MAN2A2P49641 1150 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 NUP107P57740 925 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 ID2Q02363 134 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 DDX39BQ13838 428 aaKnown RBP17.4■□□□□ 0.38
CCDC43-205ENST00000592333 PFKFB4Q16877 469 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 LYPD8Q6UX82 237 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 OR4N5Q8IXE1 308 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 KCTD4Q8WVF5 259 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 TP53INP1Q96A56 240 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 MTERF1Q99551 399 aaKnown RBP17.4■□□□□ 0.38
CCDC43-205ENST00000592333 ZNF717Q9BY31 904 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-205ENST00000592333 ZFP64Q9NPA5 681 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 NPDC1Q9NQX5 325 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-205ENST00000592333 SNX15Q9NRS6 342 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 TUBA8Q9NY65 449 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-205ENST00000592333 ASB4Q9Y574 426 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 POLQO75417 2590 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 DNAJC13O75165 2243 aa17.4■□□□□ 0.38
CCDC43-205ENST00000592333 TRGV5A0A0B4J1U4 118 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 CAPN14A8MX76 684 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 SAP18O00422 153 aaKnown RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 NADKO95544 446 aaPredicted RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 DNASE1L1P49184 302 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 HNRNPH2P55795 449 aaKnown RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 RIPPLY3P57055 190 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 SLC37A1P57057 533 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 RPS13P62277 151 aaKnown RBP17.39■□□□□ 0.37
CCDC43-205ENST00000592333 GTF2H2Q13888 395 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 TESK1Q15569 626 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 MROH9Q5TGP6 573 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 C18orf63Q68DL7 685 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 GTF2H2CQ6P1K8 395 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 ADGRD1Q6QNK2 874 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 CYP20A1Q6UW02 462 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 RNF111Q6ZNA4 994 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 CDH24Q86UP0 819 aa17.39■□□□□ 0.37
CCDC43-205ENST00000592333 NUDT13Q86X67 352 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms