RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 RHBGQ9H310 441 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 POLQO75417 2590 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 DCHS2Q6V1P9 2916 aa8.79□□□□□ -1
BRCA1-226ENST00000591534 A0A087X1B8 175 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 A8MVJ9 347 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 ADAM10O14672 748 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 GNB5O14775 395 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 TMPRSS2O15393 492 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 HS6ST1O60243 411 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 ITGA10O75578 1167 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 WISP2O76076 250 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 MYO1DO94832 1006 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 ALX3O95076 343 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 HTR3BO95264 441 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 GUCA1CO95843 209 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 AHSGP02765 367 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 GNAZP19086 355 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 MAOAP21397 527 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 HNF4AP41235 474 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 HNMTP50135 292 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 PRKAA2P54646 552 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 RAB8AP61006 207 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 PPP2R2AP63151 447 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 OLR1P78380 273 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 BTG2P78543 158 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 PLGLB1Q02325 96 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 TGM3Q08188 693 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 TESK1Q15569 626 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 TEDDM1Q5T9Z0 273 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 NDUFAF5Q5TEU4 345 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 FAM45BPQ6NSW5 357 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 SLC22A16Q86VW1 577 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 KRT78Q8N1N4 520 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 TMEM132CQ8N3T6 1108 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 NKAPQ8N5F7 415 aaKnown RBP8.78□□□□□ -1
BRCA1-226ENST00000591534 ZFP62Q8NB50 900 aaPredicted RBP8.78□□□□□ -1
BRCA1-226ENST00000591534 ACBD4Q8NC06 268 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 NFAM1Q8NET5 270 aaPredicted RBP8.78□□□□□ -1
BRCA1-226ENST00000591534 FAM45AQ8TCE6 357 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 ASB15Q8WXK1 588 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 NEIL2Q969S2 332 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 CCDC126Q96EE4 140 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 RBBP8Q99708 897 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 TREX2Q9BQ50 279 aaPredicted RBP8.78□□□□□ -1
BRCA1-226ENST00000591534 TMPRSS13Q9BYE2 586 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 HPF1Q9NWY4 346 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 MKS1Q9NXB0 559 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 KCNN3Q9UGI6 736 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 IKZF3Q9UKT9 509 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 GRID1Q9ULK0 1009 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 TMCO1Q9UM00 188 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 SH2B3Q9UQQ2 575 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 VWA7Q9Y334 891 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 PSAT1Q9Y617 370 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 CLCA3PQ9Y6N3 262 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
BRCA1-226ENST00000591534 CPAMD8Q8IZJ3 1885 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 IGKV3D-11A0A0A0MRZ8 115 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 OR14I1A6ND48 311 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 A8MUA0 341 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 COPEO14579 308 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 BCKDKO14874 412 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 KLF4O43474 513 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 B3GALT2O43825 422 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 DNAJA2O60884 412 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 GLRA3O75311 464 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 ATE1O95260 518 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 STMN1P16949 149 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 SAT1P21673 171 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 TYK2P29597 1187 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 ALDH3A1P30838 453 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 PEX19P40855 299 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 BTN3A2P78410 334 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 REEP5Q00765 189 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 SLC13A2Q13183 592 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 BMPR2Q13873 1038 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 EFTUD2Q15029 972 aaKnown RBP eCLIP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 CDSNQ15517 529 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 FAM83EQ2M2I3 478 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 CCDC153Q494R4 210 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 CMPK2Q5EBM0 449 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 TNFAIP8L3Q5GJ75 292 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 TOR1AIP1Q5JTV8 583 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 CATSPEREQ5SY80 951 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 FRA10AC1Q70Z53 315 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 TMPRSS11BQ86T26 416 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 TBC1D1Q86TI0 1168 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 TMEM200AQ86VY9 491 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 THOC6Q86W42 341 aaKnown RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 LSRQ86X29 649 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 CHERPQ8IWX8 916 aaKnown RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 ZNF595Q8IYB9 648 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 SHISA5Q8N114 240 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 AMER2Q8N7J2 671 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 APCDD1LQ8NCL9 501 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 CHDHQ8NE62 594 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-226ENST00000591534 OR5L2Q8NGL0 311 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 OR5M3Q8NGP4 307 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 DYDC1Q8WWB3 177 aa8.77□□□□□ -1.01
BRCA1-226ENST00000591534 DAZLQ92904 295 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms