RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 PAIP2Q9BPZ3 127 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 TMBIM4Q9HC24 238 aa13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 TNFRSF12AQ9NP84 129 aa13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 SIRT5Q9NXA8 310 aa13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 COPG1Q9Y678 874 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 MGAQ8IWI9 3026 aa13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 CFAP47Q6ZTR5 3102 aa13.53□□□□□ -0.24
SMARCA4-212ENST00000586985 CHD6Q8TD26 2715 aa13.52□□□□□ -0.24
SMARCA4-212ENST00000586985 GABRR3A8MPY1 467 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 DYNC1I1O14576 645 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 RSL1D1O76021 490 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 CHRNGP07510 517 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 DRD2P14416 443 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 TIA1P31483 386 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 GALNSP34059 522 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 CD96P40200 585 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 GSTM5P46439 218 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 TUBA3CQ13748 450 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 ZNF267Q14586 743 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 HEPACAMQ14CZ8 416 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 IGFBP7Q16270 282 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 SH2D4BQ5SQS7 431 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 HHATQ5VTY9 493 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 SLC48A1Q6P1K1 146 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 GALNT18Q6P9A2 607 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 TUBA3EQ6PEY2 450 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 ATCAYQ86WG3 371 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 SLC2A12Q8TD20 617 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 C16orf78Q8WTQ4 265 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 METTL2AQ96IZ6 378 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 NPAS2Q99743 824 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 PFDN4Q9NQP4 134 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 DLGAP4Q9Y2H0 992 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 ZNF780BQ9Y6R6 833 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 CACNA1GO43497 2377 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 ZFYVE26Q68DK2 2539 aa13.52□□□□□ -0.25
SMARCA4-212ENST00000586985 IGSF10Q6WRI0 2623 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 MAN1A2O60476 641 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 VPS4BO75351 444 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 ERAL1O75616 437 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 HSPA4LO95757 839 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 DDAH2O95865 285 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 LINC00032P0C843 101 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 CD46P15529 392 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 PORP16435 677 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 CSNK2A2P19784 350 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 CYB561P49447 251 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 RAE1P78406 368 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 C2orf80Q0P641 193 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 MPP2Q14168 576 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 CHI3L2Q15782 390 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 C6orf163Q5TEZ5 329 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 KANK2Q63ZY3 851 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 RPUSD3Q6P087 351 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 DDIASQ8IXT1 998 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 TMEM156Q8N614 296 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 ANKRD42Q8N9B4 389 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 FAM76AQ8TAV0 307 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 AGR3Q8TD06 166 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 SNRNP40Q96DI7 357 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 CNPPD1Q9BV87 410 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 VIPAS39Q9H9C1 493 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 LRTM1Q9HBL6 345 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 AGPAT4Q9NRZ5 378 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 ANKRD10Q9NXR5 420 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 LRFN1Q9P244 771 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 ZNF223Q9UK11 482 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 CES1P1Q9UKY3 287 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 VPS4AQ9UN37 437 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 WBP11Q9Y2W2 641 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 YARS2Q9Y2Z4 477 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 DNAJC15Q9Y5T4 150 aa13.51□□□□□ -0.25
SMARCA4-212ENST00000586985 TMEM114B3SHH9 223 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 PYCARD-AS1I3L0S3 204 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 PRAMEF2O60811 474 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 WISP1O95388 367 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 SERPINE1P05121 402 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 IL3P08700 152 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 DHRS4L1P0CG22 281 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 CPMP14384 443 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 NT5EP21589 574 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 GRK2P25098 689 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 ST13P50502 369 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 ERVK-8P63133 956 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 RNF4P78317 190 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 FOXK1P85037 733 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 OR1C1Q15619 314 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 SPINK14Q6IE38 97 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 NOXRED1Q6NXP6 359 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 DGAT2L6Q6ZPD8 337 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 RNF165Q6ZSG1 346 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 SAMD14Q8IZD0 417 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 ARMC10Q8N2F6 343 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 ZNF321PQ8N8H1 164 aa13.5□□□□□ -0.25
SMARCA4-212ENST00000586985 OR6Y1Q8NGX8 325 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms