RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PROM1O43490 865 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 KIF1CO43896 1103 aaKnown RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 LRP3O75074 770 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 KRT36O76013 467 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SOX30O94993 753 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 C8BP07358 591 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 PORP16435 677 aaPredicted RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 GPX2P18283 190 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 GGT1P19440 569 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 EFNA1P20827 205 aaPredicted RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 NT5EP21589 574 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ALAS2P22557 587 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CD1CP29017 333 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CSF2RBP32927 897 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 VHLP40337 213 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CDKN2CP42773 168 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 LSSP48449 732 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CCT3P49368 545 aaKnown RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 DSTNP60981 165 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 OLR1P78380 273 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 RHDQ02161 417 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SLC34A1Q06495 639 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 VEZF1Q14119 521 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SERTAD2Q14140 314 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 RGNQ15493 299 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 VMACQ2NL98 169 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ZNF385BQ569K4 471 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 C18orf63Q68DL7 685 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 LRRC74BQ6ZQY2 392 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 TTLL10Q6ZVT0 673 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 USP53Q70EK8 1073 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 KANSL1Q7Z3B3 1105 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 C16orf62Q7Z3J2 963 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 UBE3DQ7Z6J8 389 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 BPHLQ86WA6 291 aaPredicted RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 PPP1R3BQ86XI6 285 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 KRT73Q86Y46 540 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ZNF595Q8IYB9 648 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CA13Q8N1Q1 262 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 D2HGDHQ8N465 521 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ENDOVQ8N8Q3 282 aaKnown RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 OR9A4Q8NGU2 314 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.84□□□□□ -1.47
LIG3-206ENST00000586058 ZFP90Q8TF47 636 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 PYDC1Q8WXC3 89 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 KLHL6Q8WZ60 621 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 COL26A1Q96A83 441 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 MIEF2Q96C03 454 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CLIP3Q96DZ5 547 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SLC47A1Q96FL8 570 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 AURKBQ96GD4 344 aaPredicted RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 SLC41A2Q96JW4 573 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ART5Q96L15 291 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CCDC74BQ96LY2 380 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 DGAT2Q96PD7 388 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 OR1F2PQ96R84 312 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ZNF607Q96SK3 696 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 PHOX2BQ99453 314 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CDC6Q99741 560 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 DPH2Q9BQC3 489 aaPredicted RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 NUDT22Q9BRQ3 303 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SPATA5L1Q9BVQ7 753 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 PCDHAC1Q9H158 963 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 KAT8Q9H7Z6 458 aaKnown RBP5.84□□□□□ -1.47
LIG3-206ENST00000586058 S100A14Q9HCY8 104 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 FAM60AQ9NP50 221 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 LHX9Q9NQ69 397 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SERHLQ9NQF3 203 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 PRTFDC1Q9NRG1 225 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 FGF21Q9NSA1 209 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 STARD5Q9NSY2 213 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 EXD2Q9NVH0 621 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SLC25A37Q9NYZ2 338 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CALML5Q9NZT1 146 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SLAMF8Q9P0V8 285 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 HCN3Q9P1Z3 774 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 C5AR2Q9P296 337 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 PTGFRNQ9P2B2 879 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 TRPC4Q9UBN4 977 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 CD300AQ9UGN4 299 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 RAPGEFL1Q9UHV5 662 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 SLC13A4Q9UKG4 626 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ZNF451Q9Y4E5 1061 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ATG4BQ9Y4P1 393 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 ASB4Q9Y574 426 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 AP4S1Q9Y587 144 aa5.84□□□□□ -1.47
LIG3-206ENST00000586058 EXPH5Q8NEV8 1989 aa5.84□□□□□ -1.48
LIG3-206ENST00000586058 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 TRBV5-3A0A0A0MS03 114 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 A0A1W2PR48 441 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 LNP1A1A4G5 178 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 FITM1A5D6W6 292 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 MYO1GB0I1T2 1018 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 C4orf51C9J302 202 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 D6RAR5 112 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 SGK494L7N484 410 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 B4GAT1O43505 415 aa5.83□□□□□ -1.48
LIG3-206ENST00000586058 DEAF1O75398 565 aaPredicted RBP5.83□□□□□ -1.48
LIG3-206ENST00000586058 SCRG1O75711 98 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms