RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 SEMA3GQ9NS98 782 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 FAF1Q9UNN5 650 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 USP22Q9UPT9 525 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 ERVK-11Q9UQG0 969 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 KLHL20Q9Y2M5 609 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 RAXQ9Y2V3 346 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 SLC22A7Q9Y694 548 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 SPACA6W5XKT8 324 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CROCCQ5TZA2 2017 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 A0A0J9YVX5 310 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 A0A1B0GTQ1 180 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 RHPN2P1A8MT19 583 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 MYO1GB0I1T2 1018 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 H0YGG7 62 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 PPM1DO15297 605 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 DENRO43583 198 aaKnown RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 CTSVO60911 334 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 B3GALT4O96024 378 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 NTRK1P04629 796 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ZNF888P0CJ79 500 aaPredicted RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 ALOX12P18054 663 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 CSNK2A2P19784 350 aaPredicted RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 CDH3P22223 829 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 CRATP43155 626 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 GPR3P46089 330 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 CAPZBP47756 277 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ARF3P61204 181 aaPredicted RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 ADRM1Q16186 407 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 LRRC36Q1X8D7 754 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 COL28A1Q2UY09 1125 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 CCDC157Q569K6 752 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 SFT2D3Q587I9 215 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 SAXO2Q658L1 398 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 HMBOX1Q6NT76 420 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 IRGCQ6NXR0 463 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 SLC48A1Q6P1K1 146 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 TMEM64Q6YI46 380 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 CBLL1Q75N03 491 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 CCDC80Q76M96 950 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 EIF3MQ7L2H7 374 aaKnown RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 AMIGO2Q86SJ2 522 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 TRIM73Q86UV7 250 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 PTOV1Q86YD1 416 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 GATAD2AQ86YP4 633 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 GALNT15Q8N3T1 639 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 OR6C4Q8NGE1 309 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 OR8K5Q8NH50 307 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 SFXN5Q8TD22 340 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 EXOSC8Q96B26 276 aaKnown RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 TBC1D20Q96BZ9 403 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 SLC47A1Q96FL8 570 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ZDHHC12Q96GR4 267 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 TRAPPC9Q96Q05 1148 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ELF4Q99607 663 aaPredicted RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 SEPHS2Q99611 448 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 CCDC3Q9BQI4 270 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 OSBPL10Q9BXB5 764 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 EPS8L2Q9H6S3 715 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ADPRHL2Q9NX46 363 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 TEX10Q9NXF1 929 aaPredicted RBP9.82□□□□□ -0.84
LIG3-203ENST00000585370 DNAJB9Q9UBS3 223 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 DKK4Q9UBT3 224 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 UTS2RQ9UKP6 389 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ENTPD4Q9Y227 616 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ZNF780BQ9Y6R6 833 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 KALRNO60229 2985 aa9.82□□□□□ -0.84
LIG3-203ENST00000585370 ARHGEF17Q96PE2 2063 aaPredicted RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 A0A1W2PR48 441 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 BLACEA4D250 179 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 TMEM247A6NEH6 219 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 YKT6O15498 198 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 NUDT21O43809 227 aaKnown RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 DPM1O60762 260 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 TNFRSF21O75509 655 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 PRKD3O94806 890 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 PRSS23O95084 383 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 SERPINA1P01009 418 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 IFI6P09912 130 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 NR2F6P10588 404 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 ZNF26P17031 533 aaPredicted RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 TYRP1P17643 537 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 EFNA1P20827 205 aaPredicted RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 CPN2P22792 545 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 CCT3P49368 545 aaKnown RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 MVDP53602 400 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 EMP3P54852 163 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 MAZP56270 477 aaKnown RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 RAB8AP61006 207 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 GAB1Q13480 694 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 MED21Q13503 144 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 SPIDRQ14159 915 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 GNA13Q14344 377 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 CEBPEQ15744 281 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 NDUFA9Q16795 377 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 PRSS53Q2L4Q9 553 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 SPDYE7PQ495Y7 208 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.81□□□□□ -0.84
LIG3-203ENST00000585370 C6orf132Q5T0Z8 1188 aa9.81□□□□□ -0.84
LIG3-203ENST00000585370 TMEM214Q6NUQ4 689 aaKnown RBP9.81□□□□□ -0.84
LIG3-203ENST00000585370 TLDC1Q6P9B6 456 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms