RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CFAP73A6NFT4 308 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 E9PMD0 336 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PLK4O00444 970 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CTDSPLO15194 276 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CLIC2O15247 247 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC16A4O15374 487 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CFLARO15519 480 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ST8SIA3O43173 380 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ZSCAN12O43309 604 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 GRAP2O75791 330 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 B3GAT3O94766 335 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 OR6A2O95222 327 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MBPP02686 304 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 H1F0P07305 194 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SAGP10523 405 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CEACAM1P13688 526 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 IRF2P14316 349 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NCF1P14598 390 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 GNSP15586 552 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DDX5P17844 614 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CD82P27701 267 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SSR1P43307 286 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MAPK12P53778 367 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MTCP1P56278 107 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 P2RX3P56373 397 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PSPHP78330 225 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RPL36AP83881 106 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ELP6Q0PNE2 266 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MRPL28Q13084 256 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 XRCC4Q13426 336 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 LASP1Q14847 261 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NR1D2Q14995 579 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TAF13Q15543 124 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MLF2Q15773 248 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PARP15Q460N3 678 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CLLU1OSQ5K130 101 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 GSG1LQ6UXU4 331 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CFAP77Q6ZQR2 320 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC16A12Q6ZSM3 486 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC26A9Q7LBE3 791 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM110Q86TL2 294 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RFX6Q8HWS3 928 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DDIASQ8IXT1 998 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC35F3Q8IY50 421 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DNAJC22Q8N4W6 341 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DCLK2Q8N568 766 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PTPMT1Q8WUK0 201 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SCFD1Q8WVM8 642 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CKAP2Q8WWK9 683 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PTP4A1Q93096 173 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ERGIC1Q969X5 290 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RBM41Q96IZ5 413 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC41A2Q96JW4 573 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 BTN2A3PQ96KV6 586 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 QRFPRQ96P65 431 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TM2D2Q9BX73 214 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 POLDIP3Q9BY77 421 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRC2Q9BYS8 371 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TKTL2Q9H0I9 626 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 IL25Q9H293 177 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TRABDQ9H4I3 376 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 PARVAQ9NVD7 372 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 HPCAL4Q9UM19 191 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ICAM5Q9UMF0 924 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ERVW-1Q9UQF0 538 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 JRKLQ9Y4A0 524 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 YIPF1Q9Y548 306 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 HELZP42694 1942 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 LOC102723996A0A087X1L8 192 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MYBPHLA2RUH7 354 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MTMR11A4FU01 709 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ANKUB1A6NFN9 424 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 A8MXQ7 604 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 H0YC42 278 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM189A1O60320 539 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 APBB3O95704 486 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 VTNP04004 478 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 H2AFZP0C0S5 128 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CALCBP10092 127 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 UNGP13051 313 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DAOP14920 347 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DNAJB1P25685 340 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 MARK3P27448 753 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 HOXD9P28356 352 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CHRNA3P32297 505 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TNFSF8P32971 234 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RPL21P46778 160 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CAMLGP49069 296 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF84P51523 738 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 DVL1P1P54792 670 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CDH4P55283 916 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 CCL23P55773 120 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 ELFN2Q5R3F8 820 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 UGT3A1Q6NUS8 523 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TTC27Q6P3X3 843 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 FIGLAQ6QHK4 219 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 RBPMS2Q6ZRY4 209 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 TPRG1Q6ZUI0 275 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 H2AFVQ71UI9 128 aa1.81□□□□□ -2.12
SMCHD1-211ENST00000584897 NRARPQ7Z6K4 114 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms