RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 NSMAFQ92636 917 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 CORO2AQ92828 525 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 TEKT1Q969V4 418 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 DTNBP1Q96EV8 351 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 C18orf12Q96KH6 178 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 AGAP3Q96P47 875 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 KLHL5Q96PQ7 755 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 KRT12Q99456 494 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 TRIM51Q9BSJ1 452 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 EDEM2Q9BV94 578 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 FGFBP2Q9BYJ0 223 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 PUS3Q9BZE2 481 aaKnown RBP3.78□□□□□ -1.8
NF1-220ENST00000581113 EGLN1Q9GZT9 426 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 ACTL8Q9H568 366 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 VCPKMTQ9H867 229 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 GLRX2Q9NS18 164 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 PANK4Q9NVE7 773 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 PKD2L2Q9NZM6 624 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 TMOD2Q9NZR1 351 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 SEPT10Q9P0V9 454 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 EXTL2Q9UBQ6 330 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 SNX7Q9UNH6 387 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 CAB39Q9Y376 341 aaPredicted RBP3.78□□□□□ -1.8
NF1-220ENST00000581113 BRCA1P38398 1863 aaKnown RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 SCN7AQ01118 1682 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 A0A087WUV0 522 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 A0A0J9YWU9 116 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 TRBV4-1A0A0J9YWV2 114 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 ANTXRLA6NF34 631 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 ANXA2P2A6NMY6 339 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 ERVV-1B6SEH8 477 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 C2CD4DB7Z1M9 353 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 CCDC188H7C350 402 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 H7C423 109 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 WDR46O15213 610 aaKnown RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 LETM1O95202 739 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 TBX6O95947 436 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 ALPPP05187 535 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 ASGR1P07306 291 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 ALPPL2P10696 532 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 PDGFRAP16234 1089 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 EPORP19235 508 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RGS7P49802 495 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 METAP1P53582 386 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RIPK4P57078 832 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 GMFBP60983 142 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 CACNG1Q06432 222 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RIPK1Q13546 671 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 TMEM132DQ14C87 1099 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RBBP7Q16576 425 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 C6orf136Q5SQH8 315 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 C12orf60Q5U649 245 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 CES4AQ5XG92 561 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 TRIM65Q6PJ69 517 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 KIF6Q6ZMV9 814 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 LINC00696Q6ZRV3 163 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 C15orf52Q6ZUT6 534 aaKnown RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 SLC24A5Q71RS6 500 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 FCRLAQ7L513 359 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 NRARPQ7Z6K4 114 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 ABI3BPQ7Z7G0 1075 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 LRTM2Q8N967 370 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 MRPL43Q8N983 215 aaKnown RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 URGCPQ8TCY9 931 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 SLC13A3Q8WWT9 602 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 SLC5A11Q8WWX8 675 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 SLCO2A1Q92959 643 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 ZNF689Q96CS4 500 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 MOCOSQ96EN8 888 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 BTBD9Q96Q07 612 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RUFY1Q96T51 708 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 FERMT1Q9BQL6 677 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 MGME1Q9BQP7 344 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 GCOM2Q9BZD3 368 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 SDCBP2Q9H190 292 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RIMS4Q9H426 269 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 YY1AP1Q9H869 796 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RNF121Q9H920 327 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 IL1RAPL2Q9NP60 686 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RBM28Q9NW13 759 aaKnown RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 UBAP1Q9NZ09 502 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 ARMCX3Q9UH62 379 aaPredicted RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 ASIC3Q9UHC3 531 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 LIPT1Q9Y234 373 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 NAALAD2Q9Y3Q0 740 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 RNF215Q9Y6U7 377 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 AFDNP55196 1824 aaKnown RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 VIRMAQ69YN4 1812 aaKnown RBP3.77□□□□□ -1.81
NF1-220ENST00000581113 ARFGEF1Q9Y6D6 1849 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 MAP3K15Q6ZN16 1313 aa3.77□□□□□ -1.81
NF1-220ENST00000581113 KPNA7A9QM74 516 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 IFIT3O14879 490 aaKnown RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 AKR7A3O95154 331 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 IGHEP01854 428 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 ARF4P18085 180 aaPredicted RBP3.76□□□□□ -1.81
NF1-220ENST00000581113 PRKACGP22612 351 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 DNAJB1P25685 340 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 SFTPDP35247 375 aa3.76□□□□□ -1.81
NF1-220ENST00000581113 CASP3P42574 277 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms