RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 CCDC188H7C350 402 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 OR10H2O60403 315 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 IL2RAP01589 272 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 CD1DP15813 335 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 ALOX15P16050 662 aaPredicted RBP16.49■□□□□ 0.23
MKS1-209ENST00000580127 KLK2P20151 261 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 ADH7P40394 386 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 BUD31P41223 144 aaPredicted RBP16.49■□□□□ 0.23
MKS1-209ENST00000580127 PAFAH1B1P43034 410 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 ARFIP1P53367 373 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 PHEXP78562 749 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 IGLV3-21P80748 117 aaPredicted RBP16.49■□□□□ 0.23
MKS1-209ENST00000580127 DEPDC1Q5TB30 811 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 KHDRBS2Q5VWX1 349 aaKnown RBP16.49■□□□□ 0.23
MKS1-209ENST00000580127 RNF111Q6ZNA4 994 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 UBE3DQ7Z6J8 389 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 LIX1LQ8IVB5 337 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 OR4N5Q8IXE1 308 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 LAS2Q8IYD9 372 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 PM20D2Q8IYS1 436 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 ST13P4Q8IZP2 240 aaPredicted RBP16.49■□□□□ 0.23
MKS1-209ENST00000580127 PDPRQ8NCN5 879 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 NEIL3Q8TAT5 605 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 NRGNQ92686 78 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 POM121Q96HA1 1249 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 DOHHQ9BU89 302 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 TRIM31Q9BZY9 425 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 WDR41Q9HAD4 459 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 NMRAL1Q9HBL8 299 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 SEMA4BQ9NPR2 832 aaPredicted RBP16.49■□□□□ 0.23
MKS1-209ENST00000580127 RASSF1Q9NS23 344 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 OPTCQ9UBM4 332 aa16.49■□□□□ 0.23
MKS1-209ENST00000580127 ZNF629Q9UEG4 869 aaPredicted RBP16.49■□□□□ 0.23
MKS1-209ENST00000580127 OR6C76A6NM76 312 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 E7ESA3 106 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 FAM155BO75949 473 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 SCELO95171 688 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 EPPINO95925 133 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 IGKV3-11P04433 115 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 FOSL1P15407 271 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 EPB42P16452 691 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 PTX3P26022 381 aaPredicted RBP16.48■□□□□ 0.23
MKS1-209ENST00000580127 SPRP35270 261 aaPredicted RBP16.48■□□□□ 0.23
MKS1-209ENST00000580127 RPP38P78345 283 aaKnown RBP16.48■□□□□ 0.23
MKS1-209ENST00000580127 HLA-DQA1Q5Y7H0 255 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 ZNF793Q6ZN11 406 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 CYS1Q717R9 158 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 ULK2Q8IYT8 1036 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 LRRC25Q8N386 305 aaPredicted RBP16.48■□□□□ 0.23
MKS1-209ENST00000580127 OR7G3Q8NG95 312 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 RIT1Q92963 219 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 PPWD1Q96BP3 646 aaKnown RBP16.48■□□□□ 0.23
MKS1-209ENST00000580127 GPATCH1Q9BRR8 931 aaKnown RBP16.48■□□□□ 0.23
MKS1-209ENST00000580127 ANGPTL3Q9Y5C1 460 aa16.48■□□□□ 0.23
MKS1-209ENST00000580127 C15orf38-AP3S2A0A0A6YYH1 394 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 ANKRD33BA6NCL7 494 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 RTCAO00442 366 aaKnown RBP16.47■□□□□ 0.23
MKS1-209ENST00000580127 PHGDHO43175 533 aaKnown RBP16.47■□□□□ 0.23
MKS1-209ENST00000580127 FGF17O60258 216 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 ZNF354AO60765 605 aaPredicted RBP16.47■□□□□ 0.23
MKS1-209ENST00000580127 PRAMEF4O60810 478 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 TRAPPC6AO75865 159 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 SNX4O95219 450 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 GPR75O95800 540 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 C1QAP02745 245 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 FBXO45P0C2W1 286 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 CD22P20273 847 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 BMP5P22003 454 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 PIK3CBP42338 1070 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 ASCL1P50553 236 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 RAB10P61026 200 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 CALCOCO2Q13137 446 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 CBLBQ13191 982 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 ZNF267Q14586 743 aaPredicted RBP16.47■□□□□ 0.23
MKS1-209ENST00000580127 OR4D1Q15615 310 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 CEBPEQ15744 281 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 FLYWCH1Q4VC44 716 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 FBXO48Q5FWF7 155 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 PRAMEF20Q5VT98 475 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 PRAMEF9Q5VWM5 478 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 ADNP2Q6IQ32 1131 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 CAPN12Q6ZSI9 719 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 RAPH1Q70E73 1250 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 PACS2Q86VP3 889 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 C9orf40Q8IXQ3 194 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 EXT2Q93063 718 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 RNASE6Q93091 150 aaKnown RBP16.47■□□□□ 0.23
MKS1-209ENST00000580127 REPS1Q96D71 796 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 HSPBAP1Q96EW2 488 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 UBXN10Q96LJ8 280 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 GAL3ST4Q96RP7 486 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 GPR22Q99680 433 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 WDR83Q9BRX9 315 aaKnown RBP16.47■□□□□ 0.23
MKS1-209ENST00000580127 MCMBPQ9BTE3 642 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 ZNF703Q9H7S9 590 aaPredicted RBP16.47■□□□□ 0.23
MKS1-209ENST00000580127 CAB39LQ9H9S4 337 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 SH2D2AQ9NP31 389 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 NUDT4Q9NZJ9 180 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 PCDHGA11Q9Y5H2 935 aa16.47■□□□□ 0.23
MKS1-209ENST00000580127 AKAP9Q99996 3911 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms