RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 MSRAQ9UJ68 235 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 ENPP5Q9UJA9 477 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 HCN2Q9UL51 889 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 WDR37Q9Y2I8 494 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CDK5RAP2Q96SN8 1893 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 DUXAA6NLW8 204 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 PCDH17O14917 1159 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 KHNYNO15037 678 aaKnown RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CYBAP13498 195 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 EDNRAP25101 427 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 SP140Q13342 867 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 ZNF542PQ5EBM4 170 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 THOC7Q6I9Y2 204 aaKnown RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 MTFR2Q6P444 385 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CEP68Q76N32 757 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 B3GNT8Q7Z7M8 397 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 PAPD5Q8NDF8 572 aaKnown RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 FUZQ9BT04 418 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CDADC1Q9BWV3 514 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CD300AQ9UGN4 299 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CDH7Q9ULB5 785 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 PCDHGB6Q9Y5F9 930 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 COL16A1Q07092 1604 aaPredicted RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 N4BP2Q86UW6 1770 aaPredicted RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 A0A1W2PP55 124 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 IGLON5A6NGN9 336 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 OR7A17O14581 309 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 EEF1E1O43324 174 aaKnown RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 KDM4BO94953 1096 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 ITGA3P26006 1051 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 GRPRP30550 384 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 GRK6P43250 576 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 GCGRP47871 477 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 BTBD16Q32M84 506 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 C17orf99Q6UX52 265 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 ZNF740Q8NDX6 193 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 TBC1D15Q8TC07 691 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 C16orf78Q8WTQ4 265 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 HMGB4Q8WW32 186 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 ZSWIM3Q96MP5 696 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 GPER1Q99527 375 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 HEBP1Q9NRV9 189 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 NUFIP1Q9UHK0 495 aaKnown RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 DLGAP1O14490 977 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CLDN4O14493 209 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 UQCRC2P22695 453 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 FSHRP23945 695 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 HRH2P25021 359 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 GMFBP60983 142 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 SIM1P81133 766 aaPredicted RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 FIGNL1Q6PIW4 674 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
ERBB2-206ENST00000578373 GJD3Q8N144 294 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 CYB561A3Q8NBI2 242 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 B3GNT7Q8NFL0 401 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 GNG8Q9UK08 70 aa11.5□□□□□ -0.57
ERBB2-206ENST00000578373 A0A1W2PQL4 384 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 TGM5O43548 720 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 HK1P19367 917 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 GSTM3P21266 225 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 PROX2Q3B8N5 592 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 AMZ1Q400G9 498 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 XKR4Q5GH76 650 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 B3GLCTQ6Y288 498 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 ZNF548Q8NEK5 533 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 SLCO4A1Q96BD0 722 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 OTUB2Q96DC9 234 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 MAELQ96JY0 434 aaKnown RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 CARD8Q9Y2G2 431 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 SPEF1Q9Y4P9 236 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 ENPP4Q9Y6X5 453 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 TOGARAM1Q9Y4F4 1720 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 CACNA1IQ9P0X4 2223 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 ARNTLO00327 626 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 PCDHGA12O60330 932 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 IFNA6P05013 189 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 AKT2P31751 481 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 PTGES3Q15185 160 aaKnown RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 BTN2A1Q7KYR7 527 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 OR52E4Q8NGH9 312 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 C11orf84Q9BUA3 381 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 CENPMQ9NSP4 180 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 PLD2O14939 933 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 AREL1O15033 823 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 MAZP56270 477 aaKnown RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 CAV3P56539 151 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 FADDQ13158 208 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 SLC5A12Q1EHB4 618 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 SOWAHCQ53LP3 525 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 FCRLBQ6BAA4 426 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 ADGRD2Q7Z7M1 963 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 Q8N9G6 341 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 ASCC1Q8N9N2 400 aaKnown RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 GRPEL2Q8TAA5 225 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 MYEOVQ96EZ4 313 aa11.49□□□□□ -0.57
ERBB2-206ENST00000578373 FAM46AQ96IP4 442 aaKnown RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 ZNF300Q96RE9 604 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-206ENST00000578373 NDC1Q9BTX1 674 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms