RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 BNC1Q01954 994 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 MYBPC3Q14896 1274 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 DEFB110Q30KQ9 67 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 REEP3Q6NUK4 255 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 NIPAL1Q6NVV3 410 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 TNFAIP8L2Q6P589 184 aaPredicted RBP27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 PATL1Q86TB9 770 aaKnown RBP27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 OR10Q1Q8NGQ4 319 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 TBC1D20Q96BZ9 403 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 SDCCAG3Q96C92 435 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 AHCYL2Q96HN2 611 aaKnown RBP27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 TGM7Q96PF1 710 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 C3orf14Q9HBI5 128 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 ANKHQ9HCJ1 492 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 TMEM74BQ9NUR3 256 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 BAG5Q9UL15 447 aa27.45■■□□□ 1.99
CTDNEP1-208ENST00000573600 HCRTR1O43613 425 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 GLB1P16278 677 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 ALDH4A1P30038 563 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 GPR3P46089 330 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 CRYBA2P53672 197 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 PCBP3P57721 371 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 SKP1P63208 163 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 DUSP2Q05923 314 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 SRSF5Q13243 272 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 NDUFA9Q16795 377 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 PRTGQ2VWP7 1150 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 ZNF750Q32MQ0 723 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 PLK5Q496M5 336 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 CARFQ8N187 725 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 METTL25Q8N6Q8 603 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 LZICQ8WZA0 190 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 NCSTNQ92542 709 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 GATA6Q92908 595 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 TPD52L3Q96J77 140 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 STARD5Q9NSY2 213 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 PLCL2Q9UPR0 1127 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 ZNF451Q9Y4E5 1061 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 MAGEA13PA6NCF6 341 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 TMEM247A6NEH6 219 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 C5orf58C9J3I9 102 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 EMC8O43402 210 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 C9P02748 559 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 FHP07954 510 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 GIMD1P0DJR0 217 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 MLLT3P42568 568 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 RPS26P62854 115 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 TXNL4AP83876 142 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 PRR5P85299 388 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 SHBQ15464 509 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 C6orf52Q5T4I8 152 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 PIWIL3Q7Z3Z3 882 aaKnown RBP27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 VTCN1Q7Z7D3 282 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 ZDHHC13Q8IUH4 622 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 SLC35F3Q8IY50 421 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 LRRC25Q8N386 305 aaPredicted RBP27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 CSF3RQ99062 836 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 PDE7BQ9NP56 450 aa27.44■■□□□ 1.98
CTDNEP1-208ENST00000573600 HMGN4O00479 90 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 EI24O14681 340 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 KIF1CO43896 1103 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 KHKP50053 298 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 GFERP55789 205 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 OLR1P78380 273 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 PDK3Q15120 406 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 USP53Q70EK8 1073 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 PRSS41Q7RTY9 318 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 SZRD1Q7Z422 152 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 MAML2Q8IZL2 1156 aaPredicted RBP27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 CA13Q8N1Q1 262 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 ARHGEF39Q8N4T4 335 aa27.43■■□□□ 1.98
CTDNEP1-208ENST00000573600 IGHV1OR21-1A0A087WYE8 117 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 ZNF860A6NHJ4 632 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 G3V2T6 193 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 M0QX08 132 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 MATN1P21941 496 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 XKP51811 444 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 MRPS35P82673 323 aaKnown RBP27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 NR1D2Q14995 579 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 OR5K1Q8NHB7 308 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 ZNF285Q96NJ3 590 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 SOHLH2Q9NX45 425 aa27.42■■□□□ 1.98
CTDNEP1-208ENST00000573600 DNAJB6O75190 326 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 ZBTB11O95625 1053 aaPredicted RBP27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 TFPTP0C1Z6 253 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 GABRA4P48169 554 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 CLCN2P51788 898 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 RAB38P57729 211 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 KCNJ10P78508 379 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 GPLD1P80108 840 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 SIM1P81133 766 aaPredicted RBP27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 NHSL2Q5HYW2 709 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 TMEM107Q6UX40 140 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 OR9A2Q8NGT5 310 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 SLC38A5Q8WUX1 472 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 ELP4Q96EB1 424 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 OR51I1Q9H343 314 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 NLGN3Q9NZ94 848 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 DUX1O43812 170 aa27.41■■□□□ 1.98
CTDNEP1-208ENST00000573600 EPHA8P29322 1005 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms