RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 NUF2Q9BZD4 464 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 LRTM1Q9HBL6 345 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 P4HTMQ9NXG6 502 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 FBXW2Q9UKT8 454 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 ZGRF1Q86YA3 2104 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 A0A1W2PR48 441 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 FAM58BPP0C7Q3 252 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 ITGA3P26006 1051 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 TIA1P31483 386 aaKnown RBP eCLIP20.14■□□□□ 0.81
UBFD1-210ENST00000571064 MDH1P40925 334 aaKnown RBP20.14■□□□□ 0.81
UBFD1-210ENST00000571064 HK2P52789 917 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 ACSM2AQ08AH3 577 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 RFTN2Q52LD8 501 aaPredicted RBP20.14■□□□□ 0.81
UBFD1-210ENST00000571064 SPIN4Q56A73 249 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 CCNYL2Q5T2Q4 361 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 ACSM2BQ68CK6 577 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 CYP20A1Q6UW02 462 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 RIPOR1Q6ZS17 1223 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 PAGE2Q7Z2X7 111 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 GPR180Q86V85 440 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 CRLF3Q8IUI8 442 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 FAM47BQ8NA70 645 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 PIWIL2Q8TC59 973 aaKnown RBP20.14■□□□□ 0.81
UBFD1-210ENST00000571064 OR1F2PQ96R84 312 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 C14orf105Q9NVL8 296 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 C1orf109Q9NX04 203 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 MCM8Q9UJA3 840 aa20.14■□□□□ 0.81
UBFD1-210ENST00000571064 NXT1Q9UKK6 140 aaKnown RBP20.14■□□□□ 0.81
UBFD1-210ENST00000571064 SETD2Q9BYW2 2564 aaPredicted RBP20.13■□□□□ 0.81
UBFD1-210ENST00000571064 PROM1O43490 865 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 PCDH7O60245 1069 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 KLHL41O60662 606 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 B4GALT2O60909 372 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 SEC22BO75396 215 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 PRKRAO75569 313 aaKnown RBP20.13■□□□□ 0.81
UBFD1-210ENST00000571064 CDC123O75794 336 aaPredicted RBP20.13■□□□□ 0.81
UBFD1-210ENST00000571064 CD63P08962 238 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 EDN3P14138 238 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 IL10P22301 178 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 FOLR3P41439 243 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 BTG2P78543 158 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 RHAGQ02094 409 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 TUBB8Q3ZCM7 444 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 C18orf63Q68DL7 685 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 KIRREL3Q8IZU9 778 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 TM4SF18Q96CE8 201 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 CCT7Q99832 543 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 WDR77Q9BQA1 342 aaPredicted RBP20.13■□□□□ 0.81
UBFD1-210ENST00000571064 EBPLQ9BY08 206 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 VN1R1Q9GZP7 353 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 LYARQ9NX58 379 aaKnown RBP20.13■□□□□ 0.81
UBFD1-210ENST00000571064 TEX10Q9NXF1 929 aaPredicted RBP20.13■□□□□ 0.81
UBFD1-210ENST00000571064 ITGB1BP2Q9UKP3 347 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 DLGAP4Q9Y2H0 992 aa20.13■□□□□ 0.81
UBFD1-210ENST00000571064 POLR3HQ9Y535 204 aaPredicted RBP20.13■□□□□ 0.81
UBFD1-210ENST00000571064 SDHDO14521 159 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 HDAC3O15379 428 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 PEX11AO75192 247 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 PRR35P0CG20 571 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 SOX8P57073 446 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 TNFRSF17Q02223 184 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 GALNTL6Q49A17 601 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 C6orf136Q5SQH8 315 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 MMP21Q8N119 569 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 FAR1Q8WVX9 515 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 METTL2AQ96IZ6 378 aaKnown RBP20.12■□□□□ 0.81
UBFD1-210ENST00000571064 LURAP1Q96LR2 239 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 CRB3Q9BUF7 120 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 CCDC134Q9H6E4 229 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 AKTIPQ9H8T0 292 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 MEAF6Q9HAF1 191 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 C3orf18Q9UK00 162 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 MKL2Q9ULH7 1088 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 CLDN16Q9Y5I7 305 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 SVILO95425 2214 aa20.12■□□□□ 0.81
UBFD1-210ENST00000571064 WASHC1A8K0Z3 465 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 IDSB3KWA1 339 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 TGFBR3LH3BV60 316 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 PSMD12O00232 456 aaPredicted RBP20.11■□□□□ 0.81
UBFD1-210ENST00000571064 EDF1O60869 148 aaKnown RBP20.11■□□□□ 0.81
UBFD1-210ENST00000571064 AIFM1O95831 613 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 IGHEP01854 428 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 HEXBP07686 556 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 STSP08842 583 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 CPN2P22792 545 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 MAPK12P53778 367 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 GYS2P54840 703 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 EMP2P54851 167 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 RPL38P63173 70 aaKnown RBP20.11■□□□□ 0.81
UBFD1-210ENST00000571064 MINDY4Q4G0A6 757 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 NOXRED1Q6NXP6 359 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 PPP1R32Q7Z5V6 425 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 PLPP5Q8NEB5 264 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 ADAMTS18Q8TE60 1221 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 C16orf78Q8WTQ4 265 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 TUBGCP3Q96CW5 907 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 PPP3R2Q96LZ3 170 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 WDR55Q9H6Y2 383 aaPredicted RBP20.11■□□□□ 0.81
UBFD1-210ENST00000571064 ATP13A2Q9NQ11 1180 aa20.11■□□□□ 0.81
UBFD1-210ENST00000571064 VTI1BQ9UEU0 232 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms