RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ZNF793Q6ZN11 406 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 PM20D2Q8IYS1 436 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 SNX31Q8N9S9 440 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 NAXEQ8NCW5 288 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 FAM13CQ8NE31 585 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 TNIP2Q8NFZ5 429 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 ANKRD49Q8WVL7 239 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 C18orf12Q96KH6 178 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 JSRP1Q96MG2 331 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-204ENST00000570902 PRM3Q9NNZ6 103 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 PSAT1Q9Y617 370 aa17.46■□□□□ 0.39
SCARF1-204ENST00000570902 A0A1B0GTL3 188 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 SCELO95171 688 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 HIST1H1TP22492 207 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-204ENST00000570902 CPN2P22792 545 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 GDF1P27539 372 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 PAFAH1B1P43034 410 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 MSH2P43246 934 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 PLIN5Q00G26 463 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 ILF2Q12905 390 aaKnown RBP17.45■□□□□ 0.38
SCARF1-204ENST00000570902 MORF4L2Q15014 288 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 PDK4Q16654 411 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 AP5B1Q2VPB7 878 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 CDKL4Q5MAI5 379 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 TBCELQ5QJ74 424 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 LYPD8Q6UX82 237 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 UBE3DQ7Z6J8 389 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 WFDC11Q8NEX6 87 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 HSPBAP1Q96EW2 488 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 FBXL20Q96IG2 436 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 KRT12Q99456 494 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 TMEM79Q9BSE2 394 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 DOHHQ9BU89 302 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 DERL2Q9GZP9 239 aa17.45■□□□□ 0.38
SCARF1-204ENST00000570902 CHCHD2Q9Y6H1 151 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-204ENST00000570902 TAPBPO15533 448 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 FGF17O60258 216 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 PRAMEF4O60810 478 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 STK16O75716 305 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 FBXO45P0C2W1 286 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 ADSLP30566 484 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-204ENST00000570902 TRPC1P48995 793 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 SLC12A2P55011 1212 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 SORDQ00796 357 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 DR1Q01658 176 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 MGAT5Q09328 741 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 DUSP8Q13202 625 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 PRAMEF9Q5VWM5 478 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 SULT1C3Q6IMI6 304 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 CHSY3Q70JA7 882 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 SLC29A4Q7RTT9 530 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 BBOF1Q8ND07 529 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 OR10G3Q8NGC4 313 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 UBE2E3Q969T4 207 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 ZNF597Q96LX8 424 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 MS4A8Q9BY19 250 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 PHACTR1Q9C0D0 580 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 PROK2Q9HC23 129 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 NEUROD4Q9HD90 331 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 MS4A12Q9NXJ0 267 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 TEX264Q9Y6I9 313 aa17.44■□□□□ 0.38
SCARF1-204ENST00000570902 IQANK1A0A1B0GTG1 560 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 C1QAP02745 245 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 CD22P20273 847 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 SERPINB1P30740 379 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 HOXC12P31275 282 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 SSR2P43308 183 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 HSPA7P48741 367 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 IRF8Q02556 426 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 CRYZQ08257 329 aaKnown RBP17.43■□□□□ 0.38
SCARF1-204ENST00000570902 TBCCQ15814 346 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 TMEM198Q66K66 360 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 POMZP3Q6PJE2 187 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 GPSM1Q86YR5 675 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 OR4N5Q8IXE1 308 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 TANKQ92844 425 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 GAL3ST4Q96RP7 486 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 TIMP4Q99727 224 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 PELOQ9BRX2 385 aaKnown RBP17.43■□□□□ 0.38
SCARF1-204ENST00000570902 RPF2Q9H7B2 306 aaKnown RBP17.43■□□□□ 0.38
SCARF1-204ENST00000570902 NSMCE4AQ9NXX6 385 aa17.43■□□□□ 0.38
SCARF1-204ENST00000570902 CNOT11Q9UKZ1 510 aaKnown RBP17.43■□□□□ 0.38
SCARF1-204ENST00000570902 ANKRD33BA6NCL7 494 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 CAPN14A8MX76 684 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 RTCAO00442 366 aaKnown RBP17.42■□□□□ 0.38
SCARF1-204ENST00000570902 INHBBP09529 407 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 TLX1P31314 330 aaPredicted RBP17.42■□□□□ 0.38
SCARF1-204ENST00000570902 RPL21P46778 160 aaKnown RBP17.42■□□□□ 0.38
SCARF1-204ENST00000570902 ZNF136P52737 540 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 CHIT1Q13231 466 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 NTRK2Q16620 822 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 NSUN5P2Q63ZY6 315 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 RNF111Q6ZNA4 994 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 TAGAPQ8N103 731 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 ZNF473Q8WTR7 871 aaKnown RBP17.42■□□□□ 0.38
SCARF1-204ENST00000570902 PPWD1Q96BP3 646 aaKnown RBP17.42■□□□□ 0.38
SCARF1-204ENST00000570902 WDR83Q9BRX9 315 aaKnown RBP17.42■□□□□ 0.38
SCARF1-204ENST00000570902 YIPF4Q9BSR8 244 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 WWTR1Q9GZV5 400 aa17.42■□□□□ 0.38
SCARF1-204ENST00000570902 PRDM14Q9GZV8 571 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms