RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ACKR4Q9NPB9 350 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 QPCTLQ9NXS2 382 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 TUBA8Q9NY65 449 aaPredicted RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 ACAD8Q9UKU7 415 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 ANGPTL3Q9Y5C1 460 aa13.84□□□□□ -0.19
RNF40-209ENST00000566703 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.84□□□□□ -0.19
RNF40-209ENST00000566703 A0A087X1B8 175 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 TRGV5A0A0B4J1U4 118 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 IQANK1A0A1B0GTG1 560 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 ATP6AP2A0A1C7CYW4 349 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 OR6C76A6NM76 312 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 H0YIV9 168 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 SAP18O00422 153 aaKnown RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 PLPP1O14494 284 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 PROM1O43490 865 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 SH3BGRLO75368 114 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 ATP6AP2O75787 350 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 FAM155BO75949 473 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 NADKO95544 446 aaPredicted RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 GPR75O95800 540 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 GLI4P10075 376 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 SERPINB3P29508 390 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 DNASE1L1P49184 302 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 PLTPP55058 493 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 PHEXP78562 749 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 FOLH1Q04609 750 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 CUL3Q13618 768 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 SETDB1Q15047 1291 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 ACAP2Q15057 778 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 FAM83EQ2M2I3 478 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 SPRED3Q2MJR0 410 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 MRM1Q6IN84 353 aaKnown RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 CMC1Q7Z7K0 106 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 OR4N5Q8IXE1 308 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 C9orf40Q8IXQ3 194 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 TEX9Q8N6V9 391 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 OR10Q1Q8NGQ4 319 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 FBF1Q8TES7 1133 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 PPWD1Q96BP3 646 aaKnown RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 REPS1Q96D71 796 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 SPACA9Q96E40 222 aaPredicted RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 ZNF559Q9BR84 538 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 DDX31Q9H8H2 851 aaKnown RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 ZFP64Q9NPA5 681 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 DMRT3Q9NQL9 472 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 LYARQ9NX58 379 aaKnown RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 BOKQ9UMX3 212 aaPredicted RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 TNPO3Q9Y5L0 923 aaKnown RBP13.83□□□□□ -0.2
RNF40-209ENST00000566703 LIPGQ9Y5X9 500 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 PDZD2O15018 2839 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 FBN2P35556 2912 aa13.83□□□□□ -0.2
RNF40-209ENST00000566703 FOXE1O00358 373 aaPredicted RBP13.82□□□□□ -0.2
RNF40-209ENST00000566703 GMPRP36959 345 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 PIGAP37287 484 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 PIK3CGP48736 1102 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 ALDH18A1P54886 795 aaKnown RBP13.82□□□□□ -0.2
RNF40-209ENST00000566703 GUCY2DQ02846 1103 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 SLMAPQ14BN4 828 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 PCBP2Q15366 365 aaKnown RBP eCLIP13.82□□□□□ -0.2
RNF40-209ENST00000566703 C1orf185Q5T7R7 199 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 C18orf63Q68DL7 685 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 RTL6Q6ICC9 239 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 ADGRD1Q6QNK2 874 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 SLC29A4Q7RTT9 530 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 LRRC25Q8N386 305 aaPredicted RBP13.82□□□□□ -0.2
RNF40-209ENST00000566703 FBXW8Q8N3Y1 598 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 FBXO25Q8TCJ0 367 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 SREK1Q8WXA9 508 aaKnown RBP13.82□□□□□ -0.2
RNF40-209ENST00000566703 SORBS1Q9BX66 1292 aaKnown RBP13.82□□□□□ -0.2
RNF40-209ENST00000566703 ACTR8Q9H981 624 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 WDR41Q9HAD4 459 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 SEMA4BQ9NPR2 832 aaPredicted RBP13.82□□□□□ -0.2
RNF40-209ENST00000566703 ASB4Q9Y574 426 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 FAM215AQ9Y5M1 114 aa13.82□□□□□ -0.2
RNF40-209ENST00000566703 A0A0G2JNJ9 132 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 ANKRD33BA6NCL7 494 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 CAPN14A8MX76 684 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 C2P06681 752 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 FBXO45P0C2W1 286 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 BSGP35613 385 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 PEX19P40855 299 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 HNRNPH2P55795 449 aaKnown RBP13.81□□□□□ -0.2
RNF40-209ENST00000566703 RPS13P62277 151 aaKnown RBP13.81□□□□□ -0.2
RNF40-209ENST00000566703 DDX39BQ13838 428 aaKnown RBP13.81□□□□□ -0.2
RNF40-209ENST00000566703 SLC25A35Q3KQZ1 300 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 TBCELQ5QJ74 424 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 RIPPLY2Q5TAB7 128 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 RNF111Q6ZNA4 994 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 DGAT2L6Q6ZPD8 337 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 CENPLQ8N0S6 344 aaPredicted RBP13.81□□□□□ -0.2
RNF40-209ENST00000566703 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
RNF40-209ENST00000566703 RIT1Q92963 219 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 TP53INP1Q96A56 240 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 MTERF1Q99551 399 aaKnown RBP13.81□□□□□ -0.2
RNF40-209ENST00000566703 EXO5Q9H790 373 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 PROK2Q9HC23 129 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 Q9UFV3 132 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 IKBKGQ9Y6K9 419 aa13.81□□□□□ -0.2
RNF40-209ENST00000566703 PHF3Q92576 2039 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms