RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 IGHG3P01860 377 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 CCL3P10147 92 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 GFAPP14136 432 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 ALOX15P16050 662 aaPredicted RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 PTX3P26022 381 aaPredicted RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 GMPRP36959 345 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 PIK3CBP42338 1070 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 NR0B1P51843 470 aaKnown RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 IGLV3-21P80748 117 aaPredicted RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 TNFRSF17Q02223 184 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 FOLH1Q04609 750 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 PCDH1Q08174 1060 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 DLG1Q12959 904 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 FAM83EQ2M2I3 478 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 HYAL4Q2M3T9 481 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 LIPJQ5W064 366 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 SLC22A10Q63ZE4 541 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 CYP20A1Q6UW02 462 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 B3GNT6Q6ZMB0 384 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 TRILQ7L0X0 811 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 SLC29A4Q7RTT9 530 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 DND1Q8IYX4 353 aaKnown RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 CLYBLQ8N0X4 340 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 RPRMLQ8N4K4 120 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 SLC15A4Q8N697 577 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 SARAFQ96BY9 339 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 NXNL1Q96CM4 212 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 FBXL20Q96IG2 436 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 MTERF1Q99551 399 aaKnown RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 TREX2Q9BQ50 279 aaPredicted RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 PELOQ9BRX2 385 aaKnown RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 SORBS1Q9BX66 1292 aaKnown RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 WDR41Q9HAD4 459 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 IGSF5Q9NSI5 407 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 LYARQ9NX58 379 aaKnown RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 TUBA8Q9NY65 449 aaPredicted RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 PYCARDQ9ULZ3 195 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 ATG4BQ9Y4P1 393 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 LIPGQ9Y5X9 500 aa11.03□□□□□ -0.64
UBR1-206ENST00000566493 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.03□□□□□ -0.64
UBR1-206ENST00000566493 A0A1B0GVC2 190 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 CCDC189A1A4V9 331 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 PLPP1O14494 284 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 AQP7O14520 342 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 SUSD5O60279 629 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 ZNF354AO60765 605 aaPredicted RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 WDR1O75083 606 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 C1QAP02745 245 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 MSX1P28360 303 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 CASQ1P31415 396 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 ZFP36L2P47974 494 aaKnown RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 PIK3CGP48736 1102 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 ARFIP1P53367 373 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 RPS13P62277 151 aaKnown RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 KCNJ2P63252 427 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 SETDB1Q15047 1291 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 PFKFB4Q16877 469 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 WLSQ5T9L3 541 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 CES4AQ5XG92 561 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 KLC3Q6P597 504 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 C9orf40Q8IXQ3 194 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 DMRTC2Q8IXT2 367 aaPredicted RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 ST13P4Q8IZP2 240 aaPredicted RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 ZCCHC7Q8N3Z6 543 aaKnown RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 RNF175Q8N4F7 328 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 FAM13CQ8NE31 585 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 MYRIPQ8NFW9 859 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 RHEBL1Q8TAI7 183 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 FBXO25Q8TCJ0 367 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 KCTD4Q8WVF5 259 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 RIT1Q92963 219 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 MRRFQ96E11 262 aaKnown RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 SPACA9Q96E40 222 aaPredicted RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 GAL3ST4Q96RP7 486 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 ZNF559Q9BR84 538 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 TTYH2Q9BSA4 534 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 CNPPD1Q9BV87 410 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 DMRT3Q9NQL9 472 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 ALKBH4Q9NXW9 302 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 CNIH4Q9P003 139 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 BOKQ9UMX3 212 aaPredicted RBP11.02□□□□□ -0.65
UBR1-206ENST00000566493 TSC22D4Q9Y3Q8 395 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 ZNF407Q9C0G0 2248 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 ADGRG4Q8IZF6 3080 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 AKAP9Q99996 3911 aa11.02□□□□□ -0.65
UBR1-206ENST00000566493 TRGV5A0A0B4J1U4 118 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 FAM47E-STBD1D6RA91 191 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 H0YIV9 168 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 PROM1O43490 865 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 UGDHO60701 494 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 HCN1O60741 890 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 GPR75O95800 540 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 IGKV3-11P04433 115 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 C2P06681 752 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 HOXD4P09016 255 aaPredicted RBP11.01□□□□□ -0.65
UBR1-206ENST00000566493 CELA3AP09093 270 aa11.01□□□□□ -0.65
UBR1-206ENST00000566493 GLI4P10075 376 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms