RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 LMO7Q8WWI1 1683 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 OVOS2A0A0G2JMS6 1433 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 OVOS2A0A0J9YW53 1432 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 BCL9O00512 1426 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 KDM6AO15550 1401 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 OVOS2Q6IE36 1432 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 TNS1Q9HBL0 1735 aaKnown RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 NWD2Q9ULI1 1742 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 LAMA3Q16787 3333 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 N4BP2Q86UW6 1770 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 SLIT3O75094 1523 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 AGAP14A8MT82 685 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 GPAA1O43292 621 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 AP5Z1O43299 807 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 RECQL5O94762 991 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 PDGFBP01127 241 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 PENKP01210 267 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 STAG3L1P0CL83 205 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 VDRP11473 427 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 EPORP19235 508 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 RPA1P27694 616 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 P2RY4P51582 365 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 EIF5P55010 431 aaKnown RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 EVCP57679 992 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 CXCL6P80162 114 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 CREB5Q02930 508 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 PAX2Q02962 417 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 PSG7Q13046 419 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 RASA2Q15283 850 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 TAF7Q15545 349 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 KCTD19Q17RG1 926 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 C17orf58Q2M2W7 97 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 RFTN2Q52LD8 501 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 C6orf163Q5TEZ5 329 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 SUSD4Q5VX71 490 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 OTPQ5XKR4 325 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 COPS6Q7L5N1 327 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 SZRD1Q7Z422 152 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 LYPD1Q8N2G4 141 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 ADAMTS16Q8TE57 1224 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 OTUB1Q96FW1 271 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 MUS81Q96NY9 551 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 PLEKHF1Q96S99 279 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 SERINC2Q96SA4 455 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 SLC25A39Q9BZJ4 359 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 CNOT10Q9H9A5 744 aaKnown RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 OLAHQ9NV23 265 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 NARFQ9UHQ1 456 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 ADGRB2O60241 1585 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 CCDC88AQ3V6T2 1871 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 USP42Q9H9J4 1324 aaKnown RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 LRP5O75197 1615 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 TOPAZ1Q8N9V7 1692 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 FLT4P35916 1363 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 TNRC18O15417 2968 aaPredicted RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 ITSN1Q15811 1721 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 NUP188Q5SRE5 1749 aa1.32□□□□□ -2.2
SMG1-212ENST00000566328 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.32□□□□□ -2.2
SMG1-212ENST00000566328 HTTP42858 3142 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 SLX4Q8IY92 1834 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 KCPQ6ZWJ8 1503 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 CACNA1SQ13698 1873 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 LRRC37A3O60309 1634 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 IGKV2-28A0A075B6P5 120 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 IGHV3-35A0A0C4DH35 117 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 FAM231BA6NCW3 169 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TMCO5BA8MYB1 307 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 MCF2LO15068 1137 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 STARD3NLO95772 234 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 IGKV2D-28P01615 120 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 HSP90AB1P08238 724 aaKnown RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 DUTP33316 252 aaKnown RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 EPS15P42566 896 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 OR3A3P47888 321 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 LIMK1P53667 647 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 EPS8Q12929 822 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 LRRC37A5PQ49AS3 106 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 LACTB2Q53H82 288 aaPredicted RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 ZNF658Q5TYW1 1059 aaPredicted RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 CCDC30Q5VVM6 783 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 PRR5LQ6MZQ0 368 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 ABRAXAS1Q6UWZ7 409 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 COX8CQ7Z4L0 72 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 NBPF5PQ86XG9 351 aaPredicted RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 EXOC8Q8IYI6 725 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 FAM9BQ8IZU0 186 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TTC5Q8N0Z6 440 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TAGAPQ8N103 731 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 C14orf178Q8N769 122 aaPredicted RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 SAMD12Q8N8I0 201 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 CLEC1AQ8NC01 280 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 GRK7Q8WTQ7 553 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 LIPHQ8WWY8 451 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 GDAP1L1Q96MZ0 367 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TECTBQ96PL2 329 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 TBX15Q96SF7 602 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 SNX25Q9H3E2 840 aa1.31□□□□□ -2.2
SMG1-212ENST00000566328 XAB2Q9HCS7 855 aaKnown RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 UBE2TQ9NPD8 197 aaPredicted RBP1.31□□□□□ -2.2
SMG1-212ENST00000566328 IARS2Q9NSE4 1012 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms