RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	MRPS23	Q9Y3D9	190 aa	Known RBP	12.5	□□□□□ -0.41
SCAPER-215	ENST00000565507		A0A075B6Q4	140 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	TLR4	O00206	839 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	TBX19	O60806	448 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	HOXD12	P35452	270 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	BSG	P35613	385 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	SOX6	P35712	828 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	GPR1	P46091	355 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ALDH9A1	P49189	494 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	DGKG	P49619	791 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	RHAG	Q02094	409 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	LRIT3	Q3SXY7	679 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	SLX4IP	Q5VYV7	408 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	RAET1G	Q6H3X3	334 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ZNF765	Q7L2R6	523 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	RBM45	Q8IUH3	476 aa	Known RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	OR5AR1	Q8NGP9	310 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	OR5P2	Q8WZ92	322 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	RAB8B	Q92930	207 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	EFHD2	Q96C19	240 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	OTUB2	Q96DC9	234 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	SLC6A18	Q96N87	628 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	RHBG	Q9H310	441 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	CLEC2D	Q9UHP7	191 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	POU2F3	Q9UKI9	436 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507		A0A0C4DFX4	3053 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	PLXND1	Q9Y4D7	1925 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	HMGN4	O00479	90 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	SOX14	O95416	240 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	C6	P13671	934 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ENDOU	P21128	410 aa	Known RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	FRK	P42685	505 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	PCBP4	P57723	403 aa	Known RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	GPM6B	Q13491	265 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	DHCR24	Q15392	516 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ARHGAP15	Q53QZ3	475 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	C12orf73	Q69YU5	71 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	CCBE1	Q6UXH8	406 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	SCAI	Q8N9R8	606 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ARRDC3	Q96B67	414 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ZNF514	Q96K75	400 aa	Predicted RBP	12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	FUZ	Q9BT04	418 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	NUAK2	Q9H093	628 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	IGFLR1	Q9H665	355 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	LHX9	Q9NQ69	397 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	EHD3	Q9NZN3	535 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ITGB1BP2	Q9UKP3	347 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ACAD8	Q9UKU7	415 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	GPR34	Q9UPC5	381 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	ASF1A	Q9Y294	204 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	NIN	Q8N4C6	2090 aa		12.49	□□□□□ -0.41
SCAPER-215	ENST00000565507	PNMA8C	A0A1B0GUJ8	204 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	ANKDD1B	A6NHY2	528 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	SEMA3D	O95025	777 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	TP53	P04637	393 aa	Predicted RBP	12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	MAPK12	P53778	367 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	MANF	P55145	182 aa	Known RBP	12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	DPT	Q07507	201 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	SPANXN2	Q5MJ10	180 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	AKAP14	Q86UN6	197 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	KRT78	Q8N1N4	520 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	CHAC2	Q8WUX2	184 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	PPP1R16A	Q96I34	528 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	F2RL3	Q96RI0	385 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	KCNS3	Q9BQ31	491 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	MS4A8	Q9BY19	250 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	BARHL1	Q9BZE3	327 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	SERHL2	Q9H4I8	314 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	FBXL12	Q9NXK8	326 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	AHSP	Q9NZD4	102 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	C5AR2	Q9P296	337 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	MGAT4B	Q9UQ53	548 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	PRKAB1	Q9Y478	270 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	KIAA1549L	Q6ZVL6	1849 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	F5	P12259	2224 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	ATG2B	Q96BY7	2078 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	C5orf58	C9J3I9	102 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	MMP20	O60882	483 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	CS	O75390	466 aa	Known RBP	12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	CKMT1A	P12532	417 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	CSTF2	P33240	577 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	SOX3	P41225	446 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	SLC6A11	P48066	632 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	KCNJ5	P48544	419 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	DCST1	Q5T197	706 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	PGBD2	Q6P3X8	592 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	C6orf120	Q7Z4R8	191 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	SMG7	Q92540	1137 aa	Known RBP	12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	RAD51AP1	Q96B01	352 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	PBX4	Q9BYU1	374 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	DNAJC27	Q9NZQ0	273 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	TMCC3	Q9ULS5	477 aa		12.48	□□□□□ -0.41
SCAPER-215	ENST00000565507	PRAMEF27	A3QJZ7	478 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	C5orf67	F2Z3F1	127 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	PDPK1	O15530	556 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	SSX4	O60224	188 aa		12.47	□□□□□ -0.41
SCAPER-215	ENST00000565507	OR10H3	O60404	316 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms