RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	P2RX6	O15547	441 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	TTI1	O43156	1089 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ASNA1	O43681	348 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ERN1	O75460	977 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	HRG	P04196	525 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	RPN2	P04844	631 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	APOA4	P06727	396 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	C8orf89	P0DMQ9	161 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ERVK-10	P10266	1014 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ICAM2	P13598	275 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CD1E	P15812	388 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ABO	P16442	354 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	IGFBP2	P18065	325 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	RHCE	P18577	417 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CTNNA2	P26232	953 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	EEF1D	P29692	281 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CTNNA1	P35221	906 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	GRIA1	P42261	906 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	PTH2R	P49190	550 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ART1	P52961	327 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	SLC16A1	P53985	500 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	TPM4	P67936	248 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	MRPS35	P82673	323 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	TFF3	Q07654	80 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	LONRF1	Q17RB8	773 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	PARP6	Q2NL67	630 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	BTBD16	Q32M84	506 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	KRTCAP3	Q53RY4	240 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ACER2	Q5QJU3	275 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	PLAG1	Q6DJT9	500 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	PRSS41	Q7RTY9	318 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	GALNTL5	Q7Z4T8	443 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CRLF3	Q8IUI8	442 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	SIAH3	Q8IW03	269 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	PRR18	Q8N4B5	295 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CSNK1A1L	Q8N752	337 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	FAM71D	Q8N9W8	422 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	OR52K1	Q8NGK4	314 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	OR4L1	Q8NH43	312 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CA5BP1	Q8WTZ4	195 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	STON2	Q8WXE9	905 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	HOXB13	Q92826	284 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	RAD51AP1	Q96B01	352 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	MVB12A	Q96EY5	273 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	SCMH1	Q96GD3	660 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	OR2A5	Q96R48	311 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CYTH2	Q99418	400 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	VKORC1	Q9BQB6	163 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	FERMT1	Q9BQL6	677 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	AIFM2	Q9BRQ8	373 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	TUBB6	Q9BUF5	446 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	RAB11FIP5	Q9BXF6	653 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	OSBPL8	Q9BZF1	889 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	VN1R1	Q9GZP7	353 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	LRRC40	Q9H9A6	602 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	C14orf105	Q9NVL8	296 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	TEKT2	Q9UIF3	430 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	NPIPA1	Q9UND3	350 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	CDC14A	Q9UNH5	594 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	PCDHGB6	Q9Y5F9	930 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	PCDHA3	Q9Y5H8	950 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	FAM169A	Q9Y6X4	670 aa		4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF4-223	ENST00000564343	NCKAP5	O14513	1909 aa		4.84	□□□□□ -1.64
TCF4-223	ENST00000564343	NKX2-6	A6NCS4	301 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	GOLGA6L19	H0YKK7	550 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343		H3BML4	177 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	NEURL1	O76050	574 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	IGLV2-14	P01704	120 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	STATH	P02808	62 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	ERG	P11308	486 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	CD99	P14209	185 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	CMPK1	P30085	196 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	MAGEA1	P43355	309 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	HTR3A	P46098	478 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	NR0B1	P51843	470 aa	Known RBP	4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	IST1	P53990	364 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	AP2B1	P63010	937 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	ACVR1	Q04771	509 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	MGAT2	Q10469	447 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	OR1C1	Q15619	314 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	FASTKD1	Q53R41	847 aa	Known RBP	4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	TSTD2	Q5T7W7	516 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	GARNL3	Q5VVW2	1013 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	ZNF425	Q6IV72	752 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	C11orf63	Q6NUN7	778 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	AFTPH	Q6ULP2	937 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	OVCH2	Q7RTZ1	564 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	PAQR7	Q86WK9	346 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	PLD3	Q8IV08	490 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	GHDC	Q8N2G8	530 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	RPRML	Q8N4K4	120 aa		4.83	□□□□□ -1.64
TCF4-223	ENST00000564343	MARVELD2	Q8N4S9	558 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms