RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 CASQ1P31415 396 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 RIPPLY3P57055 190 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 RPS13P62277 151 aaKnown RBP15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 HERVK_113P63132 956 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 ERVK-8P63133 956 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 UAP1Q16222 522 aaPredicted RBP15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 PFKFB4Q16877 469 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 FAM83EQ2M2I3 478 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 MROH9Q5TGP6 573 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 PRAMEF20Q5VT98 475 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 RNF111Q6ZNA4 994 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 DMRTC2Q8IXT2 367 aaPredicted RBP15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 LIX1Q8N485 282 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 SLC15A4Q8N697 577 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 NUBPLQ8TB37 319 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 KCTD4Q8WVF5 259 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 ATP6V1E2Q96A05 226 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 ATOH8Q96SQ7 321 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 TTYH2Q9BSA4 534 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 ERVK-6Q9BXR3 956 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 SLC24A3Q9HC58 644 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 SEMA4BQ9NPR2 832 aaPredicted RBP15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 NPDC1Q9NQX5 325 aaPredicted RBP15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 IGSF5Q9NSI5 407 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 GRHL1Q9NZI5 618 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 PYCARDQ9ULZ3 195 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 BOKQ9UMX3 212 aaPredicted RBP15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 ERVK-19Q9WJR5 959 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 ATG4BQ9Y4P1 393 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 NINQ8N4C6 2090 aa15.16■□□□□ 0.02
AC004449.1-201ENST00000564240 A0A087X1B8 175 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 GLOD5A6NK44 160 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 AQP7O14520 342 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 SUSD5O60279 629 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 PRKRAO75569 313 aaKnown RBP15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 ZWINTO95229 277 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 GPR75O95800 540 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 IGHG3P01860 377 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 MSX1P28360 303 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 PIK3CBP42338 1070 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 TNFRSF17Q02223 184 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 TBL3Q12788 808 aaKnown RBP15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 CPSF6Q16630 551 aaKnown RBP eCLIP15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 LIPJQ5W064 366 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 HLA-DQA1Q5Y7H0 255 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 KLC3Q6P597 504 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 WDR53Q7Z5U6 358 aaPredicted RBP15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 C9orf40Q8IXQ3 194 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 UBTD2Q8WUN7 234 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 RIT1Q92963 219 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 SPACA9Q96E40 222 aaPredicted RBP15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 PELOQ9BRX2 385 aaKnown RBP15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 CPSF2Q9P2I0 782 aaKnown RBP15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 PDZD2O15018 2839 aa15.15■□□□□ 0.02
AC004449.1-201ENST00000564240 HCFC1P51610 2035 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 A0A1B0GVC2 190 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 HRKO00198 91 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 PLPP1O14494 284 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 HCN1O60741 890 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 WDR1O75083 606 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 SCELO95171 688 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 HOXD4P09016 255 aaPredicted RBP15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 GLI4P10075 376 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 TRPC1P48995 793 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 HNRNPH2P55795 449 aaKnown RBP15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 NAB1Q13506 487 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 ZNF791Q3KP31 576 aaPredicted RBP15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 C1orf185Q5T7R7 199 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 TMEM198Q66K66 360 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 DGAT2L6Q6ZPD8 337 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 ST13P4Q8IZP2 240 aaPredicted RBP15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 TAGAPQ8N103 731 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 MYRIPQ8NFW9 859 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 FBXO25Q8TCJ0 367 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 ZFP64Q9NPA5 681 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 DMRT3Q9NQL9 472 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 LYARQ9NX58 379 aaKnown RBP15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 CNIH4Q9P003 139 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 B4GALT7Q9UBV7 327 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 KCNN3Q9UGI6 736 aa15.14■□□□□ 0.01
AC004449.1-201ENST00000564240 MED13LQ71F56 2210 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 WASHC1A8K0Z3 465 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 CAPN14A8MX76 684 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 FAM47E-STBD1D6RA91 191 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 PROM1O43490 865 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 KLK8O60259 260 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 LRATO95237 230 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 C2P06681 752 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 FAM58BPP0C7Q3 252 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 NR2F6P10588 404 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 GABRA1P14867 456 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 TYK2P29597 1187 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 IGLV3-21P80748 117 aaPredicted RBP15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 IRF9Q00978 393 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 FOXO1Q12778 655 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 GTF2H2Q13888 395 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 E2F2Q14209 437 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 HYAL4Q2M3T9 481 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 C6orf163Q5TEZ5 329 aa15.13■□□□□ 0.01
AC004449.1-201ENST00000564240 TTC19Q6DKK2 380 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms