RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 DCAKDQ8WVC6 231 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ART5Q96L15 291 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ERVK-6Q9BXR3 956 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ZNF717Q9BY31 904 aaPredicted RBP16.37■□□□□ 0.21
NME3-205ENST00000563854 FUT8Q9BYC5 575 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 RUBCNLQ9H714 662 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 CHST11Q9NPF2 352 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 SEMA4BQ9NPR2 832 aaPredicted RBP16.37■□□□□ 0.21
NME3-205ENST00000563854 PCTPQ9UKL6 214 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 TMCO1Q9UM00 188 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ERVK-19Q9WJR5 959 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 ITPR2Q14571 2701 aa16.37■□□□□ 0.21
NME3-205ENST00000563854 EXOC1LA0A1B0GW35 172 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 A0A1W2PR48 441 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 PROM1O43490 865 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 AIFM1O95831 613 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 P04436 131 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 TSPAN8P19075 237 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 NR0B1P51843 470 aaKnown RBP16.36■□□□□ 0.21
NME3-205ENST00000563854 IFT88Q13099 833 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 ZNF267Q14586 743 aaPredicted RBP16.36■□□□□ 0.21
NME3-205ENST00000563854 CDSNQ15517 529 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 GLE1Q53GS7 698 aaKnown RBP16.36■□□□□ 0.21
NME3-205ENST00000563854 GK5Q6ZS86 529 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 EID3Q8N140 333 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 C7orf57Q8NEG2 295 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 SLC22A8Q8TCC7 542 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 UCN3Q969E3 161 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 ISL2Q96A47 359 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 FBXL20Q96IG2 436 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 SERPINI1Q99574 410 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 TTTY12Q9BZ98 90 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 SACM1LQ9NTJ5 587 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 ASB4Q9Y574 426 aa16.36■□□□□ 0.21
NME3-205ENST00000563854 IQANK1A0A1B0GTG1 560 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 E9PLN8 166 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 STX16-NPEPL1H3BU86 382 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 FOXE1O00358 373 aaPredicted RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 STX16O14662 325 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 CLDN14O95500 239 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 GPR75O95800 540 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 CCL3P10147 92 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 CNTFP26441 200 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 DNASE1L1P49184 302 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 TRAF3Q13114 568 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 FRG2Q64ET8 278 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 MRM1Q6IN84 353 aaKnown RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 METTL2BQ6P1Q9 378 aaKnown RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 ARHGAP11AQ6P4F7 1023 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 RNF111Q6ZNA4 994 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 SLC29A4Q7RTT9 530 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 SLC22A16Q86VW1 577 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 TICAM1Q8IUC6 712 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 ST13P4Q8IZP2 240 aaPredicted RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 SDCCAG3Q96C92 435 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 FRG2BQ96QU4 278 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 VKORC1Q9BQB6 163 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 FAM173AQ9BQD7 235 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 PELOQ9BRX2 385 aaKnown RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 MRPL1Q9BYD6 325 aaKnown RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 MRPL46Q9H2W6 279 aaKnown RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 DDX31Q9H8H2 851 aaKnown RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 ZBTB26Q9HCK0 441 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.35■□□□□ 0.212e-11■■■■■ 42.6
NME3-205ENST00000563854 TEX10Q9NXF1 929 aaPredicted RBP16.35■□□□□ 0.21
NME3-205ENST00000563854 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 NFU1Q9UMS0 254 aa16.35■□□□□ 0.21
NME3-205ENST00000563854 ADAM10O14672 748 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 IGKV3-11P04433 115 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 COL6A2P12110 1019 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 AGAP20933 346 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 CNR1P21554 472 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 TNFRSF8P28908 595 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 ARFIP1P53367 373 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 BIKQ13323 160 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 PIGGQ5H8A4 983 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 OR52E8Q6IFG1 317 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 PAOXQ6QHF9 649 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 MILR1Q7Z6M3 343 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 GOLM1Q8NBJ4 401 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 FAM13CQ8NE31 585 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 OR4F6Q8NGB9 312 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 NUBPLQ8TB37 319 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 PHF10Q8WUB8 498 aaKnown RBP16.34■□□□□ 0.21
NME3-205ENST00000563854 RIT1Q92963 219 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 SGCZQ96LD1 299 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 DMRTA2Q96SC8 542 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 MRPL57Q9BQC6 102 aaKnown RBP16.34■□□□□ 0.21
NME3-205ENST00000563854 ELOVL6Q9H5J4 265 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 COQ3Q9NZJ6 369 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 LIPGQ9Y5X9 500 aa16.34■□□□□ 0.21
NME3-205ENST00000563854 A0A1W2PS29 197 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 A8MT66 165 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 NPIPA2E9PIF3 369 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 NPIPA3F8WFD2 350 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 C19orf84I3L1E1 186 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 SEMA3DO95025 777 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 LRATO95237 230 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 KLK1P06870 262 aa16.33■□□□□ 0.2
NME3-205ENST00000563854 RPS17P08708 135 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms