RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PCNX3Q9H6A9 2034 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 ZNF860A6NHJ4 632 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 NGFP01138 241 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 FSHBP01225 129 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 ATP1A3P13637 1013 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 ADRA2CP18825 462 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 CCNCP24863 283 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 PCGF2P35227 344 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 GCKP35557 465 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 BAMBIQ13145 260 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 DOC2AQ14183 400 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 ADNP2Q6IQ32 1131 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 DCUN1D2Q6PH85 259 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 CLDN19Q8N6F1 224 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 FAM83FQ8NEG4 500 aaPredicted RBP9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 SREK1Q8WXA9 508 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 ATL1Q8WXF7 558 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 ULK4Q96C45 1275 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 RHBDF1Q96CC6 855 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 IMP4Q96G21 291 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 RADILQ96JH8 1075 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 GNRHR2Q96P88 292 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 TSGA13Q96PP4 275 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 ERGIC2Q96RQ1 377 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 TRMOQ9BU70 441 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 TCF7L1Q9HCS4 588 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 HOMER3Q9NSC5 361 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 HACD3Q9P035 362 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 RSPH14Q9UHP6 348 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 CRLS1Q9UJA2 301 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 CNOT11Q9UKZ1 510 aaKnown RBP9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 NAALAD2Q9Y3Q0 740 aa9.41□□□□□ -0.9
HDGFL3-204ENST00000563790 TRAV20A0A0B4J274 112 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 ANKRD62A6NC57 917 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 ANKRD33BA6NCL7 494 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 LRRC10BA6NIK2 292 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 LGALS16A8MUM7 142 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 ABCD4O14678 606 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 KIF5CO60282 957 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 PRKRAO75569 313 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 STAMBPO95630 424 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 GAAP10253 952 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 LYL1P12980 280 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 MGAT1P26572 445 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 DEKP35659 375 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 RAG2P55895 527 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 TYRO3Q06418 890 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 BMPR2Q13873 1038 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 P2RY6Q15077 328 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 TOMM20Q15388 145 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 SLC9A3R2Q15599 337 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 MPEG1Q2M385 716 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 CT47A1Q5JQC4 288 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 TBCELQ5QJ74 424 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 GLT6D1Q7Z4J2 308 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 VN1R4Q7Z5H5 301 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 CNTD1Q8N815 330 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 FBXO15Q8NCQ5 510 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 OR8K3Q8NH51 312 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 HSD17B8Q92506 261 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 ELMO1Q92556 727 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 SPACA9Q96E40 222 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 ACAT2Q9BWD1 397 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 RNF122Q9H9V4 155 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 MRPS30Q9NP92 439 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 PARVAQ9NVD7 372 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 UTP6Q9NYH9 597 aaKnown RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 MOCS1Q9NZB8 636 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 CORO1CQ9ULV4 474 aaPredicted RBP9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 PKHD1P08F94 4074 aa9.4□□□□□ -0.9
HDGFL3-204ENST00000563790 SRRM2Q9UQ35 2752 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 GOLGA8QA0A0J9YX86 632 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 GOLGA8OA6NCC3 632 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 GOLGA8NF8WBI6 632 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 GOLGA8RI6L899 631 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 MFSD11O43934 449 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 CLPXO76031 633 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 LRATO95237 230 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 ALDOAP04075 364 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 LHX2P50458 406 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 FABP6P51161 128 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 CLDN18P56856 261 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 SLC25A11Q02978 314 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 PTPRCAPQ14761 206 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 NOMO1Q15155 1222 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 TRIP10Q15642 601 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 CTU2Q2VPK5 515 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 PIGGQ5H8A4 983 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 ZNF544Q6NX49 715 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 FAM111BQ6SJ93 734 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 RAD9BQ6WBX8 426 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 BEND4Q6ZU67 534 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 FAM214BQ7L5A3 538 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 YRDCQ86U90 279 aaKnown RBP9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 ADCY4Q8NFM4 1077 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 OR10G3Q8NGC4 313 aa9.39□□□□□ -0.91
HDGFL3-204ENST00000563790 OR51F2Q8NH61 342 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms