RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 MEP1AQ16819 746 aa10.79□□□□□ -0.68
RPAP1-204ENST00000562303 PLEKHN1Q494U1 663 aaPredicted RBP10.79□□□□□ -0.68
RPAP1-204ENST00000562303 HSD17B12Q53GQ0 312 aa10.79□□□□□ -0.68
RPAP1-204ENST00000562303 MEDAGQ5VYS4 303 aa10.79□□□□□ -0.68
RPAP1-204ENST00000562303 HMGN2P46Q86SG4 172 aa10.79□□□□□ -0.68
RPAP1-204ENST00000562303 GALNT10Q86SR1 603 aa10.79□□□□□ -0.68
RPAP1-204ENST00000562303 REV1Q9UBZ9 1251 aa10.79□□□□□ -0.68
RPAP1-204ENST00000562303 MEN1O00255 615 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 AK4P27144 223 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 RORAP35398 523 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 CST6Q15828 149 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 TUBA3EQ6PEY2 450 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 ZBTB8BQ8NAP8 495 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 RCBTB1Q8NDN9 531 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 CCNL2Q96S94 520 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 MAP3K3Q99759 626 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 RNF6Q9Y252 685 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 BORCS7-ASMTA0A0B4J1R7 106 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 B8ZZF3 427 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 SNAI1O95863 264 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 AMY2BP19961 511 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 NSDHLQ15738 373 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 ABHD17BQ5VST6 288 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 NANOS1Q8WY41 292 aaKnown RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 PEX11GQ96HA9 241 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 PRR11Q96HE9 360 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 RPF2Q9H7B2 306 aaKnown RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 DIRAS3O95661 229 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 HBQ1P09105 142 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 FRKP42685 505 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 CDH15P55291 814 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 TBPL1P62380 186 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 SLC18A2Q05940 514 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 EFR3AQ14156 821 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 RCAN2Q14206 197 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 UGT8Q16880 541 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 DCDC5Q6ZRR9 648 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 OR52P1PQ8NH57 321 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 TBC1D15Q8TC07 691 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 SGTBQ96EQ0 304 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 CDH20Q9HBT6 801 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 ZBTB26Q9HCK0 441 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 C2orf78A6NCI8 922 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 A8MVJ9 347 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 SEMA4FO95754 770 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 NPPAP01160 153 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 EPOP01588 193 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 CAV3P56539 151 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 TUBA1BP68363 451 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 TUBA4AP68366 448 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 HHEXQ03014 270 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 CRYZQ08257 329 aaKnown RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 RPL13AP3Q6NVV1 102 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 ZNF517Q6ZMY9 492 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 TUBA1AQ71U36 451 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 ZNF431Q8TF32 576 aaPredicted RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 F2RL3Q96RI0 385 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 OARD1Q9Y530 152 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 PIRO00625 290 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 SSX5O60225 188 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 GKN3PP0CG01 181 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 GRPRP30550 384 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 IST1P53990 364 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 DSC1Q08554 894 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 TUBB3Q13509 450 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 FGL2Q14314 439 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 VMACQ2NL98 169 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 LRRC37A5PQ49AS3 106 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 CES4AQ5XG92 561 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 OR52E8Q6IFG1 317 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 SHQ1Q6PI26 577 aaKnown RBP10.78□□□□□ -0.68
RPAP1-204ENST00000562303 PIGWQ7Z7B1 504 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 SORCS1Q8WY21 1168 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 GPR62Q9BZJ7 368 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 LIPT1Q9Y234 373 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 FER1L4A9Z1Z3 1794 aa10.78□□□□□ -0.68
RPAP1-204ENST00000562303 KIF1AQ12756 1690 aa10.77□□□□□ -0.68
RPAP1-204ENST00000562303 SLC19A2O60779 497 aa10.77□□□□□ -0.68
RPAP1-204ENST00000562303 PORP16435 677 aaPredicted RBP10.77□□□□□ -0.68
RPAP1-204ENST00000562303 TIA1P31483 386 aaKnown RBP eCLIP10.77□□□□□ -0.68
RPAP1-204ENST00000562303 RIDAP52758 137 aaKnown RBP10.77□□□□□ -0.68
RPAP1-204ENST00000562303 HNRNPA0Q13151 305 aaKnown RBP10.77□□□□□ -0.68
RPAP1-204ENST00000562303 MAB21L1Q13394 359 aa10.77□□□□□ -0.68
RPAP1-204ENST00000562303 GRM7Q14831 915 aa10.77□□□□□ -0.68
RPAP1-204ENST00000562303 ZBED5Q49AG3 693 aa10.77□□□□□ -0.68
RPAP1-204ENST00000562303 FAM205BPQ63HN1 556 aa10.77□□□□□ -0.68
RPAP1-204ENST00000562303 SLC27A4Q6P1M0 643 aa10.77□□□□□ -0.68
RPAP1-204ENST00000562303 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 CCRL2O00421 344 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 FAAHO00519 579 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 ANKRD28O15084 1053 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 BEST1O76090 585 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 THEGLP0DJG4 465 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 C6P13671 934 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 C5AR1P21730 350 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 HMBOX1Q6NT76 420 aa10.77□□□□□ -0.69
RPAP1-204ENST00000562303 ELMOD2Q8IZ81 293 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms