RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 IL3P08700 152 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 IFI6P09912 130 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
CDH1-204ENST00000562118 DDCP20711 480 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 HEPACAMQ14CZ8 416 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 NR6A1Q15406 480 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 SOWAHCQ53LP3 525 aaPredicted RBP12.53□□□□□ -0.4
CDH1-204ENST00000562118 LARP4Q71RC2 724 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDH1-204ENST00000562118 MAVSQ7Z434 540 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 AMER2Q8N7J2 671 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 MORN4Q8NDC4 146 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 OR8K3Q8NH51 312 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 OR14A16Q8NHC5 309 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 CTHRC1Q96CG8 243 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 NPAS2Q99743 824 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 FAIM2Q9BWQ8 316 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 EBPLQ9BY08 206 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 RNF32Q9H0A6 362 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 PFDN4Q9NQP4 134 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 PNPOQ9NVS9 261 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 GPR83Q9NYM4 423 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 ZNF639Q9UID6 485 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 FIS1Q9Y3D6 152 aa12.53□□□□□ -0.4
CDH1-204ENST00000562118 A0A1W2PS29 197 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 GLOD5A6NK44 160 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 SLCO1B7G3V0H7 640 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 K7EM74 188 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 SDHDO14521 159 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 DYNC1I1O14576 645 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 HDAC3O15379 428 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 SEC22BO75396 215 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 SKAP2O75563 359 aaPredicted RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 CLPSP04118 112 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 ITGAMP11215 1152 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 BCKDHAP12694 445 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 FRKP42685 505 aaPredicted RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 CCL11P51671 97 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 RPL38P63173 70 aaKnown RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 EMX2Q04743 252 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 MGAT2Q10469 447 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 STX4Q12846 297 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 CRB2Q5IJ48 1285 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 SPDYAQ5MJ70 313 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 DGAT2L6Q6ZPD8 337 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 PARP9Q8IXQ6 854 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 DDIASQ8IXT1 998 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 TMEM132CQ8N3T6 1108 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 OR4K14Q8NGD5 310 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 OR1N1Q8NGS0 311 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 C9orf43Q8TAL5 461 aaPredicted RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 SUN3Q8TAQ9 357 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 PIWIL2Q8TC59 973 aaKnown RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 ZNF721Q8TF20 911 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 DAZLQ92904 295 aaKnown RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 CNRIP1Q96F85 164 aaPredicted RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 FBXL20Q96IG2 436 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 THOC3Q96J01 351 aaKnown RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 MAGEB18Q96M61 343 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 LMF1Q96S06 567 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 SLC25A23Q9BV35 468 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 SLC25A18Q9H1K4 315 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 RYDENQ9NUL5 291 aaKnown RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 INTS9Q9NV88 658 aaKnown RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 POLR3HQ9Y535 204 aaPredicted RBP12.52□□□□□ -0.41
CDH1-204ENST00000562118 SPTA1P02549 2419 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 EXPH5Q8NEV8 1989 aa12.52□□□□□ -0.41
CDH1-204ENST00000562118 ATP6AP2A0A1C7CYW4 349 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 GNG14A0A1W2PPG7 69 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 TMEM200CA6NKL6 621 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 VPS4BO75351 444 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 ATP6AP2O75787 350 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 MYO1DO94832 1006 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 CPMP14384 443 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 S1PR1P21453 382 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 ERVK-8P63133 956 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 ID2Q02363 134 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 DUSP2Q05923 314 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 FUT7Q11130 342 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 MFAP5Q13361 173 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 PDCD2Q16342 344 aaPredicted RBP12.51□□□□□ -0.41
CDH1-204ENST00000562118 PRSS53Q2L4Q9 553 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 BTBD16Q32M84 506 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 ATP6AP1LQ52LC2 224 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 CAMKMTQ7Z624 323 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 OR4N5Q8IXE1 308 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 SAMD14Q8IZD0 417 aaPredicted RBP12.51□□□□□ -0.41
CDH1-204ENST00000562118 SLC2A12Q8TD20 617 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 ZNF675Q8TD23 568 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 BRIX1Q8TDN6 353 aaKnown RBP12.51□□□□□ -0.41
CDH1-204ENST00000562118 ERP27Q96DN0 273 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 MTERF3Q96E29 417 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 VMP1Q96GC9 406 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 EGLN2Q96KS0 407 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 CCDC134Q9H6E4 229 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 AKTIPQ9H8T0 292 aa12.51□□□□□ -0.41
CDH1-204ENST00000562118 TRIM45Q9H8W5 580 aaPredicted RBP12.51□□□□□ -0.41
CDH1-204ENST00000562118 CXorf21Q9HAI6 301 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms