RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SPRED3Q2MJR0 410 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 ATP6AP1LQ52LC2 224 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 OGFOD2Q6N063 350 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 IGFL2Q6UWQ7 119 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 LARP4Q71RC2 724 aaKnown RBP eCLIP9□□□□□ -0.97
RABGGTA-221ENST00000561055 SAMD14Q8IZD0 417 aaPredicted RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 ST13P4Q8IZP2 240 aaPredicted RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 EXD3Q8N9H8 876 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 APCDD1LQ8NCL9 501 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 MORN4Q8NDC4 146 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 B3GNT7Q8NFL0 401 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 FDCSPQ8NFU4 85 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 LRRC8CQ8TDW0 803 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 PTPMT1Q8WUK0 201 aaPredicted RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 DAZLQ92904 295 aaKnown RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 RBM18Q96H35 190 aaKnown RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 MAELQ96JY0 434 aaKnown RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 ZNF681Q96N22 645 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 ZNF552Q9H707 407 aaPredicted RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 RYDENQ9NUL5 291 aaKnown RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 HEY2Q9UBP5 337 aa9□□□□□ -0.97
RABGGTA-221ENST00000561055 EXO1Q9UQ84 846 aaKnown RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 TLN1Q9Y490 2541 aaKnown RBP9□□□□□ -0.97
RABGGTA-221ENST00000561055 GCN1Q92616 2671 aaKnown RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 ATP6AP2A0A1C7CYW4 349 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 GLOD5A6NK44 160 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 TRPC5OSA6NMA1 111 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 MASP2O00187 686 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 PEX11AO75192 247 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 PRKRAO75569 313 aaKnown RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 ATP6AP2O75787 350 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 ATP1B1P05026 303 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 PRPS2P11908 318 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 BCKDHAP12694 445 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 CPMP14384 443 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 PORP16435 677 aaPredicted RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 SDC1P18827 310 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 CSNK2A2P19784 350 aaPredicted RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 DDCP20711 480 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 TACR1P25103 407 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 MAPK1P28482 360 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 ASMTP46597 345 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 XKP51811 444 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 C21orf58P58505 322 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 RPL38P63173 70 aaKnown RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 PLIN5Q00G26 463 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 C2orf80Q0P641 193 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 PDCD2Q16342 344 aaPredicted RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 BTBD16Q32M84 506 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 IGFL3Q6UXB1 125 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 CRLF3Q8IUI8 442 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 WDR75Q8IWA0 830 aaKnown RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 OR4N5Q8IXE1 308 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 LGI4Q8N135 537 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 OR8K3Q8NH51 312 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 OR14A16Q8NHC5 309 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 DYDC1Q8WWB3 177 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 STON2Q8WXE9 905 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 TUBGCP3Q96CW5 907 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 MTERF3Q96E29 417 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 CNRIP1Q96F85 164 aaPredicted RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 ABHD17AQ96GS6 310 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 THOC3Q96J01 351 aaKnown RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 EGLN2Q96KS0 407 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 DGAT2Q96PD7 388 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 LMF1Q96S06 567 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 ARHGAP9Q9BRR9 750 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 SLC25A23Q9BV35 468 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 NUDT9Q9BW91 350 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 EBPLQ9BY08 206 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 AKTIPQ9H8T0 292 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 GPR83Q9NYM4 423 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 G3BP2Q9UN86 482 aaKnown RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 POLR3HQ9Y535 204 aaPredicted RBP8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 CLCA3PQ9Y6N3 262 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 BOD1L1Q8NFC6 3051 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 BSNQ9UPA5 3926 aa8.99□□□□□ -0.97
RABGGTA-221ENST00000561055 SDHDO14521 159 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 TGDSO95455 350 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 DDAH2O95865 285 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 IGKV3-11P04433 115 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 IFNA16P05015 189 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 IFI6P09912 130 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 FAM87AP0C7U9 286 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 ITGAMP11215 1152 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 COX7A2P14406 83 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 ITGA3P26006 1051 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 SOX18P35713 384 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 SOX11P35716 441 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 FRKP42685 505 aaPredicted RBP8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 CLCN2P51788 898 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 ERVK-8P63133 956 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 ID2Q02363 134 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 MAP4K2Q12851 820 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 PDE7AQ13946 482 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 GALNTL6Q49A17 601 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 CRB2Q5IJ48 1285 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 VWA5B1Q5TIE3 1220 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 AGAP7PQ5VUJ5 663 aa8.98□□□□□ -0.97
RABGGTA-221ENST00000561055 IL23RQ5VWK5 629 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms